GHSSHG/NanoRecon-App

NanoRecon App

NanoRecon App provides prebuilt Linux CLI archives for NanoRecon.

Source code and issue tracking are hosted on GitHub:

https://github.com/GHSSHG/Nanopore-Reconstruction-APP

The model weights are hosted separately:

https://huggingface.co/GHSSHG/NanoRecon

Download

wget https://huggingface.co/GHSSHG/NanoRecon-App/resolve/main/v0.1.0/nanorecon-0.1.0-linux-x86_64.tar.gz
wget https://huggingface.co/GHSSHG/NanoRecon-App/resolve/main/v0.1.0/nanorecon-0.1.0-linux-x86_64.tar.gz.sha256
sha256sum -c nanorecon-0.1.0-linux-x86_64.tar.gz.sha256
tar -xzf nanorecon-0.1.0-linux-x86_64.tar.gz

Quick Start

./nanorecon-0.1.0-linux-x86_64/bin/nanorecon --version
./nanorecon-0.1.0-linux-x86_64/bin/nanorecon doctor
./nanorecon-0.1.0-linux-x86_64/bin/nanorecon models pull
./nanorecon-0.1.0-linux-x86_64/bin/nanorecon compress input.pod5 --output output.nrpod
./nanorecon-0.1.0-linux-x86_64/bin/nanorecon decompress output.nrpod --output reconstructed.pod5

Requirements

• Linux x86_64
• NVIDIA GPU with a compatible driver
• CUDA-capable JAX runtime included in the release archive
• Network access to Hugging Face for the first model download

CPU execution is not supported by the release CLI.

v0.1.0

4557f50c3361020bd38280380631b059c7d95c458a5ff4b2bd8bc54c2fa4a0e6  nanorecon-0.1.0-linux-x86_64.tar.gz