| | """
|
| | cloud_agents.py - Cloud Agents Integration for Intelligent Task Orchestration
|
| |
|
| | This module integrates OpenPeer AI's Cloud Agents for AI-driven task distribution,
|
| | resource optimization, and intelligent scheduling of molecular docking workloads.
|
| |
|
| | Authors: OpenPeer AI, Riemann Computing Inc., Bleunomics, Andrew Magdy Kamal
|
| | Version: 1.0.0
|
| | Date: 2025
|
| | """
|
| |
|
| | import os
|
| | import json
|
| | import asyncio
|
| | from typing import Dict, List, Optional, Any
|
| | from dataclasses import dataclass, asdict
|
| | from datetime import datetime
|
| | import logging
|
| |
|
| | try:
|
| | from huggingface_hub import InferenceClient
|
| | from transformers import AutoTokenizer, AutoModel
|
| | except ImportError:
|
| | print("Warning: HuggingFace libraries not installed. Install with: pip install transformers huggingface-hub")
|
| |
|
| |
|
| | logging.basicConfig(level=logging.INFO)
|
| | logger = logging.getLogger(__name__)
|
| |
|
| |
|
| | @dataclass
|
| | class Task:
|
| | """Represents a molecular docking task"""
|
| | task_id: str
|
| | ligand_file: str
|
| | receptor_file: str
|
| | priority: str = "normal"
|
| | estimated_compute_time: float = 0.0
|
| | required_memory: int = 0
|
| | use_gpu: bool = True
|
| | status: str = "pending"
|
| | assigned_node: Optional[str] = None
|
| | created_at: datetime = None
|
| |
|
| | def __post_init__(self):
|
| | if self.created_at is None:
|
| | self.created_at = datetime.now()
|
| |
|
| |
|
| | @dataclass
|
| | class ComputeNode:
|
| | """Represents a compute node in the distributed system"""
|
| | node_id: str
|
| | cpu_cores: int
|
| | gpu_available: bool
|
| | gpu_type: Optional[str] = None
|
| | memory_gb: int = 16
|
| | current_load: float = 0.0
|
| | tasks_completed: int = 0
|
| | average_task_time: float = 0.0
|
| | is_active: bool = True
|
| | location: Optional[str] = None
|
| |
|
| |
|
| | class CloudAgentsOrchestrator:
|
| | """
|
| | AI-powered orchestration using Cloud Agents for intelligent
|
| | task distribution and resource optimization
|
| | """
|
| |
|
| | def __init__(self, config: Optional[Dict] = None):
|
| | """
|
| | Initialize Cloud Agents orchestrator
|
| |
|
| | Args:
|
| | config: Configuration dictionary
|
| | """
|
| | self.config = config or {}
|
| | self.hf_token = self.config.get('hf_token', os.getenv('HF_TOKEN'))
|
| | self.model_name = self.config.get('model_name', 'OpenPeer AI/Cloud-Agents')
|
| |
|
| | self.tasks: Dict[str, Task] = {}
|
| | self.nodes: Dict[str, ComputeNode] = {}
|
| | self.task_queue: List[str] = []
|
| |
|
| | self.client: Optional[InferenceClient] = None
|
| | self.is_initialized = False
|
| |
|
| | logger.info("CloudAgentsOrchestrator initialized")
|
| |
|
| | async def initialize(self) -> bool:
|
| | """
|
| | Initialize the Cloud Agents system
|
| |
|
| | Returns:
|
| | True if initialization successful
|
| | """
|
| | try:
|
| | logger.info("Initializing Cloud Agents...")
|
| |
|
| |
|
| | if self.hf_token:
|
| | self.client = InferenceClient(
|
| | model=self.model_name,
|
| | token=self.hf_token
|
| | )
|
| | logger.info(f"Connected to Cloud Agents model: {self.model_name}")
|
| | else:
|
| | logger.warning("HuggingFace token not provided. Using local mode.")
|
| |
|
| | self.is_initialized = True
|
| | logger.info("Cloud Agents initialized successfully")
|
| |
|
| | return True
|
| |
|
| | except Exception as e:
|
| | logger.error(f"Failed to initialize Cloud Agents: {e}")
|
| | return False
|
| |
|
| | def register_node(self, node: ComputeNode) -> bool:
|
| | """
|
| | Register a compute node with the orchestrator
|
| |
|
| | Args:
|
| | node: ComputeNode instance
|
| |
|
| | Returns:
|
| | True if registration successful
|
| | """
|
| | try:
|
| | self.nodes[node.node_id] = node
|
| | logger.info(f"Node registered: {node.node_id} (GPU: {node.gpu_available})")
|
| | return True
|
| | except Exception as e:
|
| | logger.error(f"Failed to register node: {e}")
|
| | return False
|
| |
|
| | def submit_task(self, task: Task) -> str:
|
| | """
|
| | Submit a new docking task
|
| |
|
| | Args:
|
| | task: Task instance
|
| |
|
| | Returns:
|
| | Task ID
|
| | """
|
| | self.tasks[task.task_id] = task
|
| | self.task_queue.append(task.task_id)
|
| |
|
| | logger.info(f"Task submitted: {task.task_id} (Priority: {task.priority})")
|
| |
|
| | return task.task_id
|
| |
|
| | async def optimize_task_distribution(self) -> Dict[str, Any]:
|
| | """
|
| | Use AI to optimize task distribution across nodes
|
| |
|
| | Returns:
|
| | Optimization recommendations
|
| | """
|
| | try:
|
| |
|
| | context = {
|
| | "total_tasks": len(self.tasks),
|
| | "pending_tasks": len(self.task_queue),
|
| | "active_nodes": len([n for n in self.nodes.values() if n.is_active]),
|
| | "gpu_nodes": len([n for n in self.nodes.values() if n.gpu_available]),
|
| | "avg_node_load": sum(n.current_load for n in self.nodes.values()) / max(len(self.nodes), 1)
|
| | }
|
| |
|
| |
|
| | prompt = self._create_optimization_prompt(context)
|
| |
|
| | if self.client:
|
| |
|
| | response = await self._query_cloud_agents(prompt)
|
| | recommendations = self._parse_ai_response(response)
|
| | else:
|
| |
|
| | recommendations = self._rule_based_optimization()
|
| |
|
| | logger.info(f"Optimization complete: {recommendations}")
|
| |
|
| | return recommendations
|
| |
|
| | except Exception as e:
|
| | logger.error(f"Optimization failed: {e}")
|
| | return self._rule_based_optimization()
|
| |
|
| | async def schedule_tasks(self) -> List[Dict[str, str]]:
|
| | """
|
| | Schedule pending tasks to available nodes using AI optimization
|
| |
|
| | Returns:
|
| | List of task assignments
|
| | """
|
| | assignments = []
|
| |
|
| |
|
| | recommendations = await self.optimize_task_distribution()
|
| |
|
| |
|
| | for task_id in self.task_queue[:]:
|
| | task = self.tasks.get(task_id)
|
| | if not task or task.status != "pending":
|
| | continue
|
| |
|
| |
|
| | node = self._select_optimal_node(task, recommendations)
|
| |
|
| | if node:
|
| |
|
| | task.assigned_node = node.node_id
|
| | task.status = "assigned"
|
| | node.current_load += 0.1
|
| |
|
| | assignments.append({
|
| | "task_id": task_id,
|
| | "node_id": node.node_id,
|
| | "priority": task.priority
|
| | })
|
| |
|
| | self.task_queue.remove(task_id)
|
| | logger.info(f"Task {task_id} assigned to node {node.node_id}")
|
| |
|
| | return assignments
|
| |
|
| | def _select_optimal_node(self, task: Task, recommendations: Dict) -> Optional[ComputeNode]:
|
| | """
|
| | Select the optimal node for a task based on AI recommendations
|
| |
|
| | Args:
|
| | task: Task to assign
|
| | recommendations: AI recommendations
|
| |
|
| | Returns:
|
| | Selected ComputeNode or None
|
| | """
|
| |
|
| | available_nodes = [
|
| | node for node in self.nodes.values()
|
| | if node.is_active and node.current_load < 0.9
|
| | ]
|
| |
|
| | if not available_nodes:
|
| | return None
|
| |
|
| |
|
| | if task.use_gpu:
|
| | gpu_nodes = [n for n in available_nodes if n.gpu_available]
|
| | if gpu_nodes:
|
| | available_nodes = gpu_nodes
|
| |
|
| |
|
| | available_nodes.sort(key=lambda n: (
|
| | n.current_load,
|
| | -n.tasks_completed,
|
| | n.average_task_time
|
| | ))
|
| |
|
| |
|
| | if task.priority == "critical":
|
| |
|
| | available_nodes.sort(key=lambda n: n.average_task_time)
|
| |
|
| | return available_nodes[0] if available_nodes else None
|
| |
|
| | async def _query_cloud_agents(self, prompt: str) -> str:
|
| | """
|
| | Query Cloud Agents model for intelligent decision making
|
| |
|
| | Args:
|
| | prompt: Input prompt
|
| |
|
| | Returns:
|
| | AI response
|
| | """
|
| | try:
|
| |
|
| | response = self.client.text_generation(
|
| | prompt,
|
| | max_new_tokens=500,
|
| | temperature=0.7,
|
| | top_p=0.9
|
| | )
|
| | return response
|
| | except Exception as e:
|
| | logger.error(f"Cloud Agents query failed: {e}")
|
| | return ""
|
| |
|
| | def _create_optimization_prompt(self, context: Dict) -> str:
|
| | """
|
| | Create optimization prompt for Cloud Agents
|
| |
|
| | Args:
|
| | context: System context
|
| |
|
| | Returns:
|
| | Formatted prompt
|
| | """
|
| | prompt = f"""
|
| | You are an AI orchestrator for a distributed molecular docking system.
|
| |
|
| | Current System Status:
|
| | - Total Tasks: {context['total_tasks']}
|
| | - Pending Tasks: {context['pending_tasks']}
|
| | - Active Nodes: {context['active_nodes']}
|
| | - GPU-enabled Nodes: {context['gpu_nodes']}
|
| | - Average Node Load: {context['avg_node_load']:.2f}
|
| |
|
| | Task: Optimize task distribution to:
|
| | 1. Maximize throughput
|
| | 2. Minimize waiting time for high-priority tasks
|
| | 3. Balance load across nodes
|
| | 4. Utilize GPU resources efficiently
|
| |
|
| | Provide recommendations for:
|
| | - Load balancing strategy
|
| | - Priority handling
|
| | - GPU allocation
|
| | - Estimated completion time
|
| |
|
| | Response format (JSON):
|
| | """
|
| | return prompt
|
| |
|
| | def _parse_ai_response(self, response: str) -> Dict[str, Any]:
|
| | """
|
| | Parse AI response into actionable recommendations
|
| |
|
| | Args:
|
| | response: Raw AI response
|
| |
|
| | Returns:
|
| | Parsed recommendations
|
| | """
|
| | try:
|
| |
|
| | recommendations = json.loads(response)
|
| | return recommendations
|
| | except:
|
| |
|
| | return self._rule_based_optimization()
|
| |
|
| | def _rule_based_optimization(self) -> Dict[str, Any]:
|
| | """
|
| | Fallback rule-based optimization
|
| |
|
| | Returns:
|
| | Optimization recommendations
|
| | """
|
| | return {
|
| | "strategy": "load_balanced",
|
| | "gpu_priority": True,
|
| | "max_tasks_per_node": 10,
|
| | "rebalance_threshold": 0.8
|
| | }
|
| |
|
| | def get_task_status(self, task_id: str) -> Optional[Dict[str, Any]]:
|
| | """
|
| | Get status of a specific task
|
| |
|
| | Args:
|
| | task_id: Task ID
|
| |
|
| | Returns:
|
| | Task status dictionary
|
| | """
|
| | task = self.tasks.get(task_id)
|
| | if not task:
|
| | return None
|
| |
|
| | return asdict(task)
|
| |
|
| | def get_system_statistics(self) -> Dict[str, Any]:
|
| | """
|
| | Get overall system statistics
|
| |
|
| | Returns:
|
| | Statistics dictionary
|
| | """
|
| | total_tasks = len(self.tasks)
|
| | completed_tasks = len([t for t in self.tasks.values() if t.status == "completed"])
|
| | pending_tasks = len(self.task_queue)
|
| |
|
| | active_nodes = [n for n in self.nodes.values() if n.is_active]
|
| | total_compute_power = sum(n.cpu_cores for n in active_nodes)
|
| |
|
| | return {
|
| | "total_tasks": total_tasks,
|
| | "completed_tasks": completed_tasks,
|
| | "pending_tasks": pending_tasks,
|
| | "active_nodes": len(active_nodes),
|
| | "total_compute_power": total_compute_power,
|
| | "gpu_nodes": len([n for n in active_nodes if n.gpu_available]),
|
| | "average_node_load": sum(n.current_load for n in active_nodes) / max(len(active_nodes), 1),
|
| | "throughput": completed_tasks / max((datetime.now() - list(self.tasks.values())[0].created_at).total_seconds() / 3600, 1) if self.tasks else 0
|
| | }
|
| |
|
| | async def auto_scale(self) -> Dict[str, Any]:
|
| | """
|
| | Automatically scale resources based on workload
|
| |
|
| | Returns:
|
| | Scaling recommendations
|
| | """
|
| | stats = self.get_system_statistics()
|
| |
|
| | recommendations = {
|
| | "action": "none",
|
| | "reason": "",
|
| | "suggested_nodes": 0
|
| | }
|
| |
|
| |
|
| | if stats["pending_tasks"] > stats["active_nodes"] * 5:
|
| | recommendations["action"] = "scale_up"
|
| | recommendations["suggested_nodes"] = stats["pending_tasks"] // 5
|
| | recommendations["reason"] = "High pending task count"
|
| |
|
| |
|
| | elif stats["average_node_load"] < 0.3 and stats["pending_tasks"] == 0:
|
| | recommendations["action"] = "scale_down"
|
| | recommendations["suggested_nodes"] = -1
|
| | recommendations["reason"] = "Low resource utilization"
|
| |
|
| | logger.info(f"Auto-scale recommendation: {recommendations}")
|
| |
|
| | return recommendations
|
| |
|
| |
|
| | async def main():
|
| | """Example usage of Cloud Agents orchestrator"""
|
| |
|
| |
|
| | orchestrator = CloudAgentsOrchestrator()
|
| | await orchestrator.initialize()
|
| |
|
| |
|
| | node1 = ComputeNode(
|
| | node_id="node_1",
|
| | cpu_cores=16,
|
| | gpu_available=True,
|
| | gpu_type="RTX 3090",
|
| | memory_gb=64
|
| | )
|
| | node2 = ComputeNode(
|
| | node_id="node_2",
|
| | cpu_cores=8,
|
| | gpu_available=False,
|
| | memory_gb=32
|
| | )
|
| |
|
| | orchestrator.register_node(node1)
|
| | orchestrator.register_node(node2)
|
| |
|
| |
|
| | for i in range(5):
|
| | task = Task(
|
| | task_id=f"task_{i}",
|
| | ligand_file=f"ligand_{i}.pdbqt",
|
| | receptor_file="receptor.pdbqt",
|
| | priority="normal" if i < 3 else "high"
|
| | )
|
| | orchestrator.submit_task(task)
|
| |
|
| |
|
| | assignments = await orchestrator.schedule_tasks()
|
| | print(f"Scheduled {len(assignments)} tasks")
|
| |
|
| |
|
| | stats = orchestrator.get_system_statistics()
|
| | print(f"System stats: {json.dumps(stats, indent=2)}")
|
| |
|
| |
|
| | if __name__ == "__main__":
|
| | asyncio.run(main())
|
| |
|