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finmag
finmag-master/doc/tailored_tutorials/basics.py
conf = {'nameshort': 'basics', 'names': ('Finmag Users',), 'tutorials' : ['tutorial-using-ipython-notebook', 'tutorial-example2', 'tutorial-saving-averages-demo', 'tutorial-scheduling-events', 'tutorial-relaxatio...
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finmag
finmag-master/doc/tailored_tutorials/2015-Hagen-Fuchs.py
conf = {'nameshort': 'HagenFuchs', 'names': ('Hagen Fuchs', 'Ulrich Roessler', 'Denys Makarov'), 'tutorials' : ['tutorial-using-ipython-notebook', 'tutorial-example2', 'tutorial-saving-averages-demo', 'tutorial-use-of-logging', ...
628
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py
finmag
finmag-master/doc/tailored_tutorials/hesjedahl.py
conf = {'nameshort': 'Hesjedahl', 'names': ('Thorsten Hesjedahl', 'Shilei Zhang'), 'tutorials' : ['tutorial-using-ipython-notebook', 'tutorial-example2', 'tutorial-saving-averages-demo', 'tutorial-use-of-logging', ...
510
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CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/test.py
######################################################## # This is an example of the training and test procedure # You need to adjust the training and test dataloader based on your data # CopyRight @ Xuesong Niu ######################################################## import torch import torch.nn as nn import torch.nn...
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CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/utils/__init__.py
1
0
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py
CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/utils/database/__init__.py
1
0
0
py
CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/utils/database/Pixelmap.py
import torch import torch.nn as nn import torch.nn.functional as F import torch.optim as optim from torch.autograd import Variable import os import shutil import numpy as np from torch.utils.data import Dataset, DataLoader import scipy.io as sio from PIL import Image import torchvision.transforms.functional as transF ...
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CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/utils/loss/loss_cross.py
import torch import torch.nn as nn import torch.nn.functional as F import torch.optim as optim from torch.autograd import Variable, Function import os import shutil import numpy as np import scipy.io as sio from scipy.stats import norm class Cross_loss(nn.Module): def __init__(self, lambda_cross_fhr = 0.000005, la...
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CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/utils/loss/__init__.py
1
0
0
py
CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/utils/loss/loss_SNR.py
import math import torch from torch.autograd import Variable import numpy as np import torch.nn.functional as F import torch.nn as nn class SNR_loss(nn.Module): def __init__(self, clip_length = 300, delta = 3, loss_type = 1, use_wave = False): super(SNR_loss, self).__init__() self.clip_length = cl...
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CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/utils/loss/loss_r.py
import torch import torch.nn as nn import torch.nn.functional as F import torch.optim as optim from torch.autograd import Variable, Function import os import shutil import numpy as np import scipy.io as sio from scipy.stats import norm class Neg_Pearson(nn.Module): # Pearson range [-1, 1] so if < 0, abs|loss| ; if >0...
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CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/utils/model/resnet.py
import torch.nn as nn import math import torch.utils.model_zoo as model_zoo from torch.autograd import Variable import torch __all__ = ['ResNet', 'resnet18', 'resnet34', 'resnet50', 'resnet101', 'resnet152'] model_urls = { 'resnet18': 'https://download.pytorch.org/models/resnet18-5c106cde.pth', 're...
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CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/utils/model/model.py
import torch import torch.nn as nn import torch.nn.functional as F import torch.optim as optim from torch.autograd import Variable import os, sys import shutil import numpy as np import scipy.io as sio sys.path.append('..'); from utils.model.resnet import resnet18, resnet_small; from utils.model.resnet_stconv import ...
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CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/utils/model/__init__.py
1
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CVD-Physiological-Measurement
CVD-Physiological-Measurement-master/utils/model/model_disentangle.py
import torch import torch.nn as nn import torch.nn.functional as F import os, sys import shutil import numpy as np import scipy.io as sio sys.path.append('..'); from utils.model.resnet import resnet18, resnet18_part; import time class ResidualBlock(nn.Module): """Residual Block.""" def __init__(self, dim_in,...
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CREPE
CREPE-master/crepe_prod_eval_cyclip.py
# Copyright (c) Meta Platforms, Inc. and affiliates. # All rights reserved. # # This source code is licensed under the BSD-style license found in the # LICENSE file in the root directory of this source tree. import ast import argparse import logging import os from PIL import Image, ImageFile from dataclasses import da...
5,815
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CREPE
CREPE-master/crepe_prod_eval_albef.py
# Copyright (c) Meta Platforms, Inc. and affiliates. # All rights reserved. # # This source code is licensed under the BSD-style license found in the # LICENSE file in the root directory of this source tree. import logging import os from PIL import Image from time import time import torch from torch import nn from to...
7,966
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CREPE
CREPE-master/crepe_prod_eval_flava.py
# Copyright (c) Meta Platforms, Inc. and affiliates. # All rights reserved. # # This source code is licensed under the BSD-style license found in the # LICENSE file in the root directory of this source tree. import ast import logging import os from PIL import Image from dataclasses import dataclass from time import t...
6,056
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CREPE
CREPE-master/crepe_prod_eval_clip.py
import logging import os from time import time import json import torch import torchvision.transforms.functional as TF import clip from torch.utils.data import DataLoader import numpy as np import pandas as pd from crepe_eval_utils import BaseCsvDataset, get_one2many_rank, get_one2many_metrics, DataInfo from crepe_p...
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CREPE
CREPE-master/crepe_compo_eval_open_clip.py
import os import json import logging import torch import numpy as np import torch.nn.functional as F import torchvision.transforms.functional as TF from torch.utils.data import DataLoader from torch.utils.data.distributed import DistributedSampler from dataclasses import dataclass from open_clip import tokenize, create...
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CREPE
CREPE-master/crepe_params.py
import argparse def setup_args(): parser = argparse.ArgumentParser(description="Run image2text retrieval eval.") parser.add_argument("--compo-type", required=True, type=str, default="systematicity", help="Either systematicity or productivity") parser.add_argument("--input-dir", required=True, type=str, def...
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CREPE
CREPE-master/crepe_eval_utils.py
import ast import logging import os from PIL import Image from dataclasses import dataclass import torch from torch.utils.data import DataLoader, Dataset import numpy as np import pandas as pd logging.basicConfig(level=logging.INFO) logger = logging.getLogger() ### DATASET CONSTRUCTION class BaseCsvDataset(Dataset...
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py
CREPE
CREPE-master/open_clip/openai.py
""" OpenAI pretrained model functions Adapted from https://github.com/openai/CLIP. Originally MIT License, Copyright (c) 2021 OpenAI. """ import os import warnings from typing import Union, List import torch from .model import build_model_from_openai_state_dict from .pretrained import get_pretrained_url, list_pretr...
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CREPE
CREPE-master/open_clip/transform.py
from torchvision.transforms import Normalize, Compose, RandomResizedCrop, ToTensor, Resize, \ CenterCrop from PIL import Image def _convert_to_rgb(image): return image.convert('RGB') def image_transform( image_size: int, is_train: bool, mean=(0.48145466, 0.4578275, 0.40821073), ...
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CREPE
CREPE-master/open_clip/loss.py
import torch import torch.distributed.nn from torch import distributed as dist, nn as nn from torch.nn import functional as F try: import horovod.torch as hvd except ImportError: hvd = None def gather_features( image_features, text_features, local_loss=False, gather_with_grad=...
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CREPE
CREPE-master/open_clip/utils.py
from torch import nn as nn from torchvision.ops.misc import FrozenBatchNorm2d def freeze_batch_norm_2d(module, module_match={}, name=''): """ Converts all `BatchNorm2d` and `SyncBatchNorm` layers of provided module into `FrozenBatchNorm2d`. If `module` is itself an instance of either `BatchNorm2d` or `Syn...
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CREPE
CREPE-master/open_clip/model.py
""" CLIP Model Adapted from https://github.com/openai/CLIP. Originally MIT License, Copyright (c) 2021 OpenAI. """ from collections import OrderedDict from dataclasses import dataclass from typing import Tuple, Union, Callable, Optional import numpy as np import torch import torch.nn.functional as F from torch impor...
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CREPE
CREPE-master/open_clip/version.py
__version__ = '1.3.0'
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py
CREPE
CREPE-master/open_clip/factory.py
import json import logging import os import pathlib import re from copy import deepcopy from pathlib import Path import torch from .model import CLIP, convert_weights_to_fp16 from .openai import load_openai_model from .pretrained import get_pretrained_url, download_pretrained from .transform import image_transform ...
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CREPE
CREPE-master/open_clip/tokenizer.py
""" CLIP tokenizer Copied from https://github.com/openai/CLIP. Originally MIT License, Copyright (c) 2021 OpenAI. """ import gzip import html import os from functools import lru_cache from typing import Union, List import ftfy import regex as re import torch @lru_cache() def default_bpe(): return os.path.join(o...
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CREPE
CREPE-master/open_clip/pretrained.py
import hashlib import os import urllib import warnings from tqdm import tqdm _RN50 = dict( openai="https://openaipublic.azureedge.net/clip/models/afeb0e10f9e5a86da6080e35cf09123aca3b358a0c3e3b6c78a7b63bc04b6762/RN50.pt", yfcc15m="https://github.com/mlfoundations/open_clip/releases/download/v0.2-weights/rn50-q...
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CREPE
CREPE-master/open_clip/__init__.py
from .factory import list_models, create_model, create_model_and_transforms, add_model_config from .loss import ClipLoss from .model import CLIP, CLIPTextCfg, CLIPVisionCfg, convert_weights_to_fp16, trace_model from .openai import load_openai_model, list_openai_models from .pretrained import list_pretrained, list_pretr...
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CREPE
CREPE-master/open_clip/timm_model.py
""" timm model adapter Wraps timm (https://github.com/rwightman/pytorch-image-models) models for use as a vision tower in CLIP model. """ from collections import OrderedDict import torch.nn as nn try: import timm from timm.models.layers import Mlp, to_2tuple from timm.models.layers.attention_pool2d impor...
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py
DNN_Rover
DNN_Rover-master/ModelTrain.py
# author = michael teti from __future__ import division, print_function, absolute_import import numpy as np import tflearn from tflearn.layers.core import input_data, dropout, fully_connected from tflearn.layers.conv import conv_2d, max_pool_2d from tflearn.layers.normalization import local_response_normalization from...
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py
DNN_Rover
DNN_Rover-master/main.py
from RoverAPI import * import argparse if __name__ == '__main__': parser = argparse.ArgumentParser() parser.add_argument( '--model_name', type=str, help='path to the model file if autonomous.') parser.add_argument( '--autonomous', type=bool, default=False, help='Tr...
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py
DNN_Rover
DNN_Rover-master/NetworkSwitch.py
import os, sys import tflearn import tensorflow as tf import h5py import numpy as np from sklearn.preprocessing import scale from tflearn.layers.core import input_data, dropout, fully_connected, flatten from tflearn.layers.conv import conv_2d, max_pool_2d, highway_conv_2d, avg_pool_2d from tflearn.layers.normalization ...
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DNN_Rover
DNN_Rover-master/RoverAPI.py
from __future__ import print_function from rover.Data import * import os, sys from rover.Pygame_UI import * from rover import Rover import time import numpy as np #from scipy.misc import imresize class RoverRun(Rover): def __init__(self, fileName, network_name, autonomous, driver, rover, FPS, vie...
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py
DNN_Rover
DNN_Rover-master/tobii_interface.py.py
import tobii_research as tr import time import cv2 import numpy as np from numpy.random import randint import csv class Tobii: def __init__(self): self.cal_points = 5 self.ht, self.wd = 1024, 1280 # height and width of the display self.point_size = 10 // 2 # number of pixels in a display ...
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py
DNN_Rover
DNN_Rover-master/rover/adpcm.py
_indexAdjust = [-1, -1, -1, -1, 2, 4, 6, 8] _stepTable = [ 7, 8, 9, 10, 11, 12, 13, 14, 16, 17, 19, 21, 23, 25, 28, 31, 34, 37, 41, 45, 50, 55, 60, 66, 73, 80, 88, 97, 107, 118, 130, 143, ...
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py
DNN_Rover
DNN_Rover-master/rover/blowfish.py
import ctypes class Blowfish: def __init__(self, key): '''Uses the specified key to create a Blowfish object that you can then to encrypt and decrypt pairs of numbers. P-array is initialized with values derived from the hexadecimal digits of Pi. ''' # from https:/...
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DNN_Rover
DNN_Rover-master/rover/Data.py
import time import numpy as np import h5py import progressbar import datetime import tflearn from tflearn.layers.core import input_data import torchvision.models as models from NetworkSwitch import * import torch import torch.nn as nn from scipy.misc import imresize from skimage.transform import resize class Data(): ...
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DNN_Rover
DNN_Rover-master/rover/byteutils.py
import struct import sys def dump_bytes(bytes): for c in bytes: sys.stdout.write('%02x ' % ord(c)) sys.stdout.write('\n') def bytes_to_int(bytes, offset): return struct.unpack('i', bytes[offset:offset + 4])[0] def bytes_to_uint(bytes, offset): return struct.unpack('I', bytes[offset:offset...
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DNN_Rover
DNN_Rover-master/rover/__init__.py
import threading import socket import time import numpy as np import cv2 from rover.blowfish import Blowfish from rover.adpcm import decodeADPCMToPCM from rover.byteutils import * # Base class for handling sockets, encryption, and movement class Rover: def __init__(self): """ Creates a Rover object that y...
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DNN_Rover
DNN_Rover-master/rover/Pygame_UI.py
import pygame import numpy as np import cv2 from scipy.misc import bytescale import os import time class Pygame_UI: def __init__(self, fps, speed): pygame.init() pygame.display.set_caption('Rover Dashboard') self.screen_size = [700, 480] self.screen = pygame.display.set_mode(self.sc...
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StodAp
StodAp-master/main.py
#!/usr/bin/python # -*- coding: utf-8 -*- import functions import model import config import cPickle as pickle import time #functions.LoadODPs() #functions.LoadODPData() #functions.WriteWikiPages() #functions.CalculateStats() #functions.TagsOverN(1) #functions.TagsDistribution() #functions.TagsPerDataset() #functions...
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StodAp
StodAp-master/functions.py
########################################################## #This scripts walks through several CKAN instances given by the CKAN instances project (https://github.com/ckan/ckan-instances/blob/gh-pages/config/instances.json) and collects information about the portals, the datasets, and tags. Data are stored as objects of...
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StodAp
StodAp-master/model.py
########################################################## #This scripts walks through several CKAN instances given by the CKAN instances project (https://github.com/ckan/ckan-instances/blob/gh-pages/config/instances.json) and collects information about the portals, the datasets, and tags. Data are stored as objects of...
9,593
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py
StodAp
StodAp-master/lib.py
import time from functools import wraps def retry(ExceptionToCheck, tries=2, delay=2, backoff=1, logger=None): """Retry calling the decorated function using an exponential backoff. http://www.saltycrane.com/blog/2009/11/trying-out-retry-decorator-python/ original from: http://wiki.python.org/moin/PythonD...
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StodAp
StodAp-master/config.py
########################################################## #This scripts walks through several CKAN instances given by the CKAN instances project (https://github.com/ckan/ckan-instances/blob/gh-pages/config/instances.json) and collects information about the portals, the datasets, and tags. Data are stored as objects of...
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StodAp
StodAp-master/main_data_collection.py
#!/usr/bin/python # -*- coding: utf-8 -*- import functions functions.LoadODPs() functions.LoadODPData() functions.ListCooccurences()
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StodAp
StodAp-master/main_data_analysis.py
#!/usr/bin/python # -*- coding: utf-8 -*- import functions import config import cPickle as pickle functions.CalculateStats() #functions.TagsOverN(1) #functions.TagsDistribution() #functions.TagsPerDataset() #functions.Similarity2('naive') #functions.WriteTagsCSV() #functions.GetLanguage() #functions.MostUsedTags() #f...
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py
Rep-Learning
Rep-Learning-main/nips_supp/Meta_learning.py
from scipy.io import loadmat import numpy as np import scipy from scipy.optimize import minimize from sklearn.linear_model import LinearRegression import matplotlib.pyplot as plt import numpy.linalg as npl class optimal_representation_matrix: def __init__(self, beta, p, n, sigma_square, epsilon, beta_star): ...
22,568
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py
Rep-Learning
Rep-Learning-main/nips_supp/mom_iota.py
from scipy.io import loadmat import numpy as np # import torch # import torch.nn as nn # import torch.optim as optim # from torchvision import models # import torch.utils.data # from torch.utils import data # from torch.utils.data import DataLoader, TensorDataset import scipy from scipy.optimize import minimize from sk...
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py
Rep-Learning
Rep-Learning-main/nips_supp/SVM_MNIST.py
import numpy as np import numpy.linalg as npl import matplotlib.pyplot as plt from keras.datasets import mnist import cvxpy as cp (train_X, train_y), (test_X, test_y) = mnist.load_data() train_X=train_X.astype(float) test_X=test_X.astype(float) for i in range(len(train_X)): train_X[i]-=np.mean(train_X[i]) trai...
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Rep-Learning
Rep-Learning-main/nips_supp/Optimal_weighting.py
from scipy.io import loadmat import numpy as np import scipy from scipy.optimize import minimize from sklearn.linear_model import LinearRegression import matplotlib.pyplot as plt def computeLeftError(bSi, B, sigma_square, p, n, R): # bsi and B are vectors gamma = p/n theta = R/p idx_trun = int(p * thet...
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FORK
FORK-master/TD3-FORK/TD3_FORK.py
import copy import numpy as np import torch import torch.nn as nn import torch.nn.functional as F device = torch.device("cuda" if torch.cuda.is_available() else "cpu") class Actor(nn.Module): def __init__(self, state_dim, action_dim, max_action): super(Actor, self).__init__() self.l1 = nn.Linear(state_dim, 25...
10,157
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FORK
FORK-master/TD3-FORK/utils.py
import numpy as np import torch import math class ReplayBuffer(object): def __init__(self, state_dim, action_dim, max_size=int(1e6)): self.max_size = max_size self.ptr = 0 self.size = 0 self.state = np.zeros((max_size, state_dim)) self.action = np.zeros((max_size, action_dim)) self.next_state = np.zeros...
3,165
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FORK
FORK-master/TD3-FORK/TD3.py
import copy import numpy as np import torch import torch.nn as nn import torch.nn.functional as F device = torch.device("cuda" if torch.cuda.is_available() else "cpu") # Implementation of Twin Delayed Deep Deterministic Policy Gradients (TD3) # Paper: https://arxiv.org/abs/1802.09477 class Actor(nn.Module): def _...
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FORK
FORK-master/TD3-FORK/main_td3_fork.py
import numpy as np import torch import gym import argparse import os import copy import utils import TD3 import pandas as pd import json,os import TD3_FORK def eval_policy(policy, env_name,eval_episodes=10): eval_env = gym.make(env_name) avg_reward = 0. for _ in range(eval_episodes): state, done = eval_env.reset(...
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FORK
FORK-master/SAC-FORK/replay_memory.py
import random import numpy as np class ReplayMemory: def __init__(self, capacity, seed): random.seed(seed) self.capacity = capacity self.buffer = [] self.position = 0 def push(self, state, action, reward, next_state, done): if len(self.buffer) < self.capacity: ...
765
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FORK
FORK-master/SAC-FORK/SAC.py
import os import torch import torch.nn.functional as F from torch.optim import Adam from utils import soft_update, hard_update from model import GaussianPolicy, QNetwork, DeterministicPolicy class SAC(object): def __init__(self, num_inputs, action_space, args): self.gamma = args.gamma self.tau = ...
5,765
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FORK
FORK-master/SAC-FORK/utils.py
import numpy as np import torch import math class ReplayBuffer(object): def __init__(self, state_dim, action_dim, max_size=int(1e6)): self.max_size = max_size self.ptr = 0 self.size = 0 self.state = np.zeros((max_size, state_dim)) self.action = np.zeros((max_size, action_dim)) self.next_state = np.zeros...
3,165
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FORK
FORK-master/SAC-FORK/model.py
import torch import torch.nn as nn import torch.nn.functional as F from torch.distributions import Normal LOG_SIG_MAX = 2 LOG_SIG_MIN = -20 epsilon = 1e-6 # Initialize Policy weights def weights_init_(m): if isinstance(m, nn.Linear): torch.nn.init.xavier_uniform_(m.weight, gain=1) torch.nn.init.co...
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FORK
FORK-master/SAC-FORK/main_sac_fork.py
import argparse import datetime import gym import numpy as np import itertools import os import json import pandas as pd import torch import SAC import SAC_FORK from replay_memory import ReplayMemory def eval_policy(policy, env_name, eval_episodes=10): eval_env = gym.make(env_name) avg_reward = 0. for _ ...
9,260
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FORK
FORK-master/SAC-FORK/SAC_FORK.py
import os import torch import torch.nn.functional as F from torch.optim import Adam from utils import soft_update, hard_update from model import GaussianPolicy, QNetwork, DeterministicPolicy, Sys_R, SysModel class SAC_FORK(object): def __init__(self, num_inputs, action_space, args): self.gamma = args.gam...
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py
SIVAND
SIVAND-master/MyDD.py
import DD import helper as hp ############################################################### g_model = None g_original_method_name = None g_predicted_method_name = None g_all_data = [] g_cnt_dict = {} g_cnt_pass = [0, 0, 0] ############################################################### class MyDD(DD.DD): def...
3,896
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py
SIVAND
SIVAND-master/DD.py
#! /usr/bin/env python # $Id: DD.py,v 1.2 2001/11/05 19:53:33 zeller Exp $ # Enhanced Delta Debugging class # Copyright (c) 1999, 2000, 2001 Andreas Zeller. # This module (written in Python) implements the base delta debugging # algorithms and is at the core of all our experiments. This should # easily run on any pla...
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SIVAND
SIVAND-master/helper.py
import pandas as pd import subprocess import javalang from datetime import datetime import json ############################################################### g_deltas_types = ["token", "char"] g_simp_file = "data/tmp/sm_test.java" JAR_LOAD_JAVA_METHOD = "others/LoadJavaMethod/target/jar/LoadJavaMethod.jar" # TODO ...
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SIVAND
SIVAND-master/others/load_java_method.py
import subprocess from pathlib import Path JAR_LOAD_JAVA_METHOD = "LoadJavaMethod/target/jar/LoadJavaMethod.jar" def load_method(file_path): cmd = ['java', '-jar', JAR_LOAD_JAVA_METHOD, file_path] contents = subprocess.check_output(cmd, encoding="utf-8", close_fds=True) contents = contents.split() na...
695
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SIVAND
SIVAND-master/others/get_ast_nodes.py
import subprocess from pathlib import Path JAR_JAVA_AST_DATA = "GetAstNodes/target/jar/GetAstNodes.jar" INNER_DELIMITER = " ___INNER___ " OUTER_DELIMITER = " ___OUTER___ " def get_ast_data(str_code): cmd = ['java', '-jar', JAR_JAVA_AST_DATA, str_code] content = subprocess.check_output(cmd, encoding="utf-8", ...
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SIVAND
SIVAND-master/others/get_tokens_java.py
import javalang from pathlib import Path def get_tokens(str_code): tokens = list(javalang.tokenizer.tokenize(str_code)) tokens = [token.value for token in tokens] return tokens if __name__ == '__main__': program = Path('sample_input.java').read_text() print("program:\n{}".format(program)) pr...
367
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py
SIVAND
SIVAND-master/models/dd-great/sm_helper.py
import os import json from datetime import datetime ####################################### root_path = "/scratch/rabin/deployment/root-simplify/sm-great/" vocabulary_path = root_path + "vocab.txt" config_path = root_path + "config.yml" vm_json_root_path = "/scratch/rabin/deployment/root-simplify/data_selection/vm_r...
6,095
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SIVAND
SIVAND-master/models/dd-great/attn_model.py
import sys sys.path.append('.') sys.path.insert(0, "..") import yaml import tensorflow as tf from checkpoint_tracker import Tracker from data import data_loader, vocabulary from meta_model import VarMisuseModel import sm_helper as hp ############################################################### g_model = None g_d...
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SIVAND
SIVAND-master/models/dd-great/dd_model.py
import sys sys.path.append('.') sys.path.insert(0, "..") import yaml import tensorflow as tf from checkpoint_tracker import Tracker from data import data_loader, vocabulary from meta_model import VarMisuseModel import DD import sm_helper as hp ############################################################### g_model...
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SIVAND
SIVAND-master/models/dd-code2seq/dd_code2seq.py
from argparse import ArgumentParser import numpy as np import tensorflow as tf from config import Config from dd_model import Model import DD import sm_helper as hp ############################################################### g_model = None g_original_method_name = None g_predicted_method_name = None g_cnt_pass = ...
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py
SIVAND
SIVAND-master/models/dd-code2seq/sm_helper.py
import json import re import statistics import subprocess from datetime import datetime import javalang import pandas as pd ############################################################### # TODO: all (if) g_root_path = "/scratch/rabin/deployment/root-simplify/sm-code2seq" g_c2s_model = "/scratch/rabin/models/code2s...
10,010
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SIVAND
SIVAND-master/models/dd-code2seq/attn_code2seq.py
from argparse import ArgumentParser import numpy as np import tensorflow as tf from config import Config from dd_model import Model import sm_helper as hp ############################################################### g_model = None g_all_data = [] g_cnt_dict = {} ###################################################...
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SIVAND
SIVAND-master/models/dd-code2seq/dd_model.py
import _pickle as pickle import tensorflow as tf import reader from common import Common class Model: topk = 10 num_batches_to_log = 100 def __init__(self, config): self.config = config self.sess = tf.Session() self.eval_queue = None self.predict_queue = None s...
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SIVAND
SIVAND-master/models/dd-code2vec/dd_code2vec.py
from config import Config from dd_tensorflow_model import Code2VecModel import DD import sm_helper as hp ############################################################### g_model = None g_original_method_name = None g_predicted_method_name = None g_all_data = [] g_cnt_dict = {} g_cnt_pass = [0, 0, 0] #################...
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SIVAND
SIVAND-master/models/dd-code2vec/sm_helper.py
import json import re import subprocess from datetime import datetime import javalang import pandas as pd ############################################################### # TODO: all (if) g_root_path = "/scratch/rabin/deployment/root-simplify/sm-code2vec" g_c2v_model = "/scratch/rabin/models/code2vec/main/java-large...
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SIVAND
SIVAND-master/models/dd-code2vec/attn_code2vec.py
from config import Config from dd_tensorflow_model import Code2VecModel import sm_helper as hp ############################################################### g_model = None g_all_data = [] g_cnt_dict = {} ############################################################### if __name__ == '__main__': config = Config...
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SIVAND
SIVAND-master/models/dd-code2vec/dd_tensorflow_model.py
import tensorflow as tf from typing import Dict, Optional from path_context_reader import PathContextReader, ModelInputTensorsFormer, ReaderInputTensors, EstimatorAction from common import common from vocabularies import VocabType from config import Config from dd_model_base import Code2VecModelBase tf.compat.v1.disa...
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SIVAND
SIVAND-master/models/dd-code2vec/dd_model_base.py
import numpy as np import abc import os from typing import Optional, Dict, Tuple, Iterable from common import common from vocabularies import Code2VecVocabs, VocabType from config import Config class Code2VecModelBase(abc.ABC): def __init__(self, config: Config): self.config = config self.config....
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Higgs-ML
Higgs-ML-master/cnn.py
from __future__ import print_function import os, sys import math import pandas as pd import numpy as np import keras from keras.models import load_model from keras import backend as K from keras.callbacks import ModelCheckpoint, EarlyStopping from sklearn.model_selection import train_test_split from sklearn import ...
3,700
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py
Higgs-ML
Higgs-ML-master/func/file.py
from __future__ import print_function import os, sys import shutil def removedir(folder): filelist=[] rootdir=folder filelist=os.listdir(rootdir) for f in filelist: filepath = os.path.join(rootdir,f) if os.path.isfile(filepath): os.remove(f...
596
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py
Higgs-ML
Higgs-ML-master/func/figure.py
from __future__ import print_function import keras import numpy as np import matplotlib.pyplot as plt import math class LossHistory(keras.callbacks.Callback): def on_train_begin(self,log={}): self.losses = {'batch':[], 'epoch':[]} self.accuracy = {'batch':[], 'epoch':[]} self.val_loss = {'batch':[], 'epoch':[]...
3,107
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py
Higgs-ML
Higgs-ML-master/func/models.py
import keras from keras.models import Sequential from keras.layers import Conv2D, MaxPooling2D, Dense, Dropout, Activation, Flatten from keras.callbacks import ModelCheckpoint, EarlyStopping from keras.optimizers import SGD, Adam, Nadam def our_model(img_rows,img_cols): model=Sequential() model.add(Conv2D(64,(3,3),...
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py
Higgs-ML
Higgs-ML-master/func/__init__.py
0
0
0
py
hyperas
hyperas-master/setup.py
from setuptools import setup from setuptools import find_packages setup(name='hyperas', version='0.4.1', description='Simple wrapper for hyperopt to do convenient hyperparameter optimization for Keras models', url='http://github.com/maxpumperla/hyperas', download_url='https://github.com/maxpump...
600
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py
hyperas
hyperas-master/hyperas/distributions.py
from hyperopt.hp import choice from hyperopt.hp import randint from hyperopt.hp import pchoice from hyperopt.hp import uniform from hyperopt.hp import quniform from hyperopt.hp import loguniform from hyperopt.hp import qloguniform from hyperopt.hp import normal from hyperopt.hp import qnormal from hyperopt.hp import lo...
397
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py
hyperas
hyperas-master/hyperas/optim.py
import inspect import os import re import sys import nbformat import numpy as np from hyperopt import fmin from nbconvert import PythonExporter from .ensemble import VotingModel from .utils import ( remove_imports, remove_all_comments, extract_imports, temp_string, write_temp_files, determine_indent, with_lin...
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py
hyperas
hyperas-master/hyperas/utils.py
import ast import re import warnings from operator import attrgetter from hyperopt import space_eval class ImportParser(ast.NodeVisitor): def __init__(self): self.lines = [] self.line_numbers = [] def visit_Import(self, node): line = 'import {}'.format(self._import_names(node.names))...
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hyperas
hyperas-master/hyperas/__init__.py
0
0
0
py
hyperas
hyperas-master/hyperas/ensemble.py
import numpy as np from keras.models import model_from_yaml class VotingModel(object): def __init__(self, model_list, voting='hard', weights=None, nb_classes=None): """(Weighted) majority vote model for a given list of Keras models. Parameters ---------- model_li...
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hyperas
hyperas-master/examples/mnist_readme.py
from __future__ import print_function from hyperopt import Trials, STATUS_OK, tpe from keras.datasets import mnist from keras.layers.core import Dense, Dropout, Activation from keras.models import Sequential from keras.utils import np_utils from hyperas import optim from hyperas.distributions import choice, uniform ...
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hyperas
hyperas-master/examples/lstm.py
from __future__ import print_function from hyperopt import Trials, STATUS_OK, tpe from hyperas import optim from hyperas.distributions import choice, uniform from keras.preprocessing import sequence from keras.datasets import imdb from keras.models import Sequential from keras.layers.core import Dense, Dropout, Activat...
2,374
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py
hyperas
hyperas-master/examples/mnist_distributed.py
from hyperas import optim from hyperas.distributions import quniform, uniform from hyperopt import STATUS_OK, tpe, mongoexp import keras from keras.layers import Dense, Dropout from keras.models import Sequential from keras.optimizers import RMSprop from keras.datasets import mnist import tempfile def data(): (x_...
2,561
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py
hyperas
hyperas-master/examples/simple.py
from __future__ import print_function from hyperopt import Trials, STATUS_OK, tpe from hyperas import optim from hyperas.distributions import choice, uniform from keras.models import Sequential from keras.layers.core import Dense, Dropout, Activation from keras.optimizers import RMSprop from keras.datasets import mni...
2,737
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py
hyperas
hyperas-master/examples/complex.py
from __future__ import print_function from hyperopt import Trials, STATUS_OK, tpe from hyperas import optim from hyperas.distributions import choice, uniform from keras.models import Sequential from keras.layers.core import Dense, Dropout, Activation from keras.datasets import mnist from keras.utils import np_utils d...
3,080
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py
hyperas
hyperas-master/examples/mnist_ensemble.py
from __future__ import print_function from hyperopt import Trials, STATUS_OK, rand from hyperas import optim from hyperas.distributions import choice, uniform from sklearn.metrics import accuracy_score from keras.utils import np_utils from keras.datasets import mnist from keras.models import Sequential from keras.layer...
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py