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from typing import Dict def merge(source: Dict, destination: Dict) -> Dict: """ Deep merge two dictionaries Parameters ---------- source: Dict[Any, Any] Dictionary to merge from destination: Dict[Any, Any] Dictionary to merge to Returns ------- Dict[Any, Any] ...
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async def async_api_adjust_volume_step(hass, config, directive, context): """Process an adjust volume step request.""" # media_player volume up/down service does not support specifying steps # each component handles it differently e.g. via config. # For now we use the volumeSteps returned to figure out ...
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import os def load_recordings(path: str, activityLabelToIndexMap: dict, limit: int = None) -> 'list[Recording]': """ Load the recordings from a folder containing csv files. """ recordings = [] recording_files = os.listdir(path) recording_files = list(filter(lambda file: file.endswith('.csv'),...
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import warnings import io def load_img(path, grayscale=False, color_mode='rgb', target_size=None, interpolation='nearest'): """Loads an image into PIL format. # Arguments path: Path to image file. grayscale: DEPRECATED use `color_mode="grayscale"`. color_mode: The desired ...
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import logging import platform def check_compatible_system_and_kernel_and_prepare_profile(args): """ Checks if we can do local profiling, that for now is only available via Linux based platforms and kernel versions >=4.9 Args: args: """ res = True logging.info("Enabled profilers: {...
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import os import shutil import subprocess import glob def crop_file(in_file, out_file, ext): """Crop a NetCDF file to give rectangle using NCO. The file is automatically converted to [0,360] °E longitude format. Args: in_file: Input file path. out_file: Output file path. It will not be o...
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def get_instance_string(params): """ combine the parameters to a string mostly used for debug output use of OrderedDict is advised """ return "_".join([str(i) for i in params.values()])
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import logging import time import re def recv_bgpmon_updates(host, port, queue): """ Receive and parse the BGP update XML stream of bgpmon """ logging.info ("CALL recv_bgpmon_updates (%s:%d)", host, port) # open connection sock = _init_bgpmon_sock(host,port) data = "" stream = "" #...
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import ast def is_string_expr(expr: ast.AST) -> bool: """Check that the expression is a string literal.""" return ( isinstance(expr, ast.Expr) and isinstance(expr.value, ast.Constant) and isinstance(expr.value.value, str) )
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import numba def events_to_img( xs: np.ndarray, ys: np.ndarray, tots: np.ndarray, cluster_ids: np.ndarray, x_img: np.ndarray, y_img: np.ndarray, minimum_event_num: int = 30, extinguish_dist: float = 1.41422, # sqrt(2) = 1.41421356237 ) -> np.ndarray: ...
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import logging import requests def worker(job): """Run a single download job.""" logger = logging.getLogger("ncbi-genome-download") ret = False try: if job.full_url is not None: req = requests.get(job.full_url, stream=True) ret = save_and_check(req, job.local_file, job....
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def generate_ar(n_series, n_samples, random_state=0): """Generate a linear auto-regressive series. This simple model is defined as:: X(t) = 0.4 * X(t - 1) - 0.6 * X(t - 4) + 0.5 * N(0, 1) The task is to predict the current value using all the previous values. Parameters ---------- n_...
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import subprocess def get_current_commit_id() -> str: """Get current commit id. Returns: str: current commit id. """ command = "git rev-parse HEAD" commit_id = ( subprocess.check_output(command.split()).strip().decode("utf-8") # noqa: S603 ) return commit_id
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import re def get_raw_code(file_path): """ Removes empty lines, leading and trailing whitespaces, single and multi line comments :param file_path: path to .java file :return: list with raw code """ raw_code = [] multi_line_comment = False with open(file_path, "r") as f: for ro...
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import os def load_content(file_path): """ Loads content from file_path if file_path's extension is one of allowed ones (See ALLOWED_EXTS). Throws UnsupportedMetaException on disallowed filetypes. :param file_path: Absolute path to the file to load content from. :type file_path: ``str`` :r...
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from typing import Pattern import re def _yaml_comment_regex() -> Pattern: """ From https://yaml-multiline.info/, it states that `#` cannot appear *after* a space or a newline, otherwise it will be a syntax error (for multiline strings that don't use a block scalar). This applies to single lines as we...
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def to_list(name: str) -> "Expr": """ Aggregate to list """ return col(name).list()
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import re def format_ipc_dimension(number: float, decimal_places: int = 2) -> str: """ Format a dimension (e.g. lead span or height) according to IPC rules. """ formatted = '{:.2f}'.format(number) stripped = re.sub(r'^0\.', '', formatted) return stripped.replace('.', '')
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def mean_test(data, muy0, alternative = 'equal', alpha = 0.95): """ This function is used to create a confidence interval of two.sided hypothesis Input: data (1D array): the sample of the whole column that you want to evaluate confidence (float) : confidence_level, must be in...
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def __build_command(command, name, background=None, enable=None): """ Constuct args for systemctl command. Args: command: The systemctl command name: The unit name or name pattern background: True to have systemctl perform the command in the background enable: True to enable/disable, False to start...
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import requests def dockerFetchLatestVersion(image_name: str) -> list[str]: """ Fetches the latest version of a docker image from hub.docker.com :param image_name: image to search for :return: list of version suggestions for the image or 'not found' if error was returned """ base_url = "https:...
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import torch import torchvision def _dataset( dataset_type: str, transform: str, train: bool = True ) -> torch.utils.data.Dataset: """ Dataset: mnist: MNIST cifar10: CIFAR-10 cifar100: CIFAR-100 Transform: default: the default transform for each data set simclr: the tran...
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def inferCustomerClasses(param_file, evidence_dir, year): """ This function uses the variable elimination algorithm from libpgm to infer the customer class of each AnswerID, given the evidence presented in the socio-demographic survey responses. It returns a tuple of the dataframe with the probability...
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def MidiSegInfo(segment): """ Midi file info saved in config file for speed """ class segInfo: iMsPerTick = 0 bpm = 4 ppqn = 480 total_ticks = 0 iLengthInMs = 0 iTracks = 0 trackList = [] ver = "1.5" ret = segInfo() savedVer = IniGetValue(...
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def num_in_row(board, row, num): """True if num is already in the row, False otherwise""" return num in board[row]
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import urllib def load_mnist(dataset="mnist.pkl.gz"): """ dataset: string, the path to dataset (MNIST) """ data_dir, data_file = os.path.split(dataset) # download MNIST if not found if not os.path.isfile(dataset): origin = ( 'http://www.iro.umontreal.ca/~lisa/deep/...
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import os from sys import path def load_hs13_ZSBB_params(): """Load the standard parameters to generate SocioPatterns HS13 surrogate networks using the ZSBB model. Returns ------- :obj:`dict` The `kwargs` to pass to :func:`tacoma.ZSBB_model`. """ fn = os.path.join(path,'ht09_zsb...
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def factorial_3(n, acc=1): """ Replace all recursive tail calls f(x=x1, y=y1, ...) with (x, y, ...) = (x1, y1, ...); continue """ while True: if n < 2: return 1 * acc (n, acc) = (n - 1, acc * n) continue break
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def autocorr(x, axis=0, fast=False): """ Estimate the autocorrelation function of a time series using the FFT. :param x: The time series. If multidimensional, set the time axis using the ``axis`` keyword argument and the function will be computed for every other axis. :param ax...
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import re import dateutil def parse_date(filename_html): """Parse a file, and return the date associated with it. filename_html -- Name of file to parse. """ match = re.search(r"\d{4}-\d{2}-\d{2}", filename_html) if not match: return None match_date = match.group() file_...
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import os def build_static_runtime( workspace, compiler, module, compiler_options, executor=None, extra_libs=None, ): """Build the on-device runtime, statically linking the given modules. Parameters ---------- compiler : tvm.micro.Compiler Compiler instance used to bui...
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def mod(a1, a2): """ Function to give the remainder """ return a1 % a2
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def select_theme_dirs(): """ Load theme templates, if applicable """ if settings.THEME_DIR: return ["themes/" + settings.THEME_DIR + "/templates", "templates"] else: return ["templates"]
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def encode_string(s): """ Simple utility function to make sure a string is proper to be used in a SQL query EXAMPLE: That's my boy! -> N'That''s my boy!' """ res = "N'"+s.replace("'","''")+"'" res = res.replace("\\''","''") res = res.replace("\''","''") return res
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def email_manage(request, email_pk, action): """Set the requested email address as the primary. Can only be requested by the owner of the email address.""" email_address = get_object_or_404(EmailAddress, pk=email_pk) if not email_address.user == request.user and not request.user.is_staff: messag...
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def get_container_service_api_version(): """Get zun-api-version with format: 'container X.Y'""" return 'container ' + CONTAINER_SERVICE_MICROVERSION
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import yaml import os def prepare_config(config_path=None, schema_path=None, config=None, schema=None, base_path=None) -> Munch: """ Takes in paths to config and schema files. Validates the config against the schema, normalizes th...
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from django.utils.cache import get_cache_key from django.core.cache import cache def invalidate_view_cache(view_name, args=[], namespace=None, key_prefix=None): """ This function allows you to invalidate any view-level cache. view_name: view function you wish to invalidate or it's named url pattern ...
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def compute_ray_features_segm_2d(seg_binary, position, angle_step=5., smooth_coef=0, edge='up'): """ compute ray features vector , shift them to be starting from larges and smooth_coef them by gauss filter (from given point the close distance to boundary) :param ndarray seg_binary: np.array<height, wid...
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def visualize_bbox(img, bbox, class_name, color=(255, 0, 0) , thickness=2): """Visualizes a single bounding box on the image""" BOX_COLOR = (255, 0, 0) # Red TEXT_COLOR = (255, 255, 255) # White x_min, y_min, x_max, y_max = bbox cv2.rectangle(img, (x_min, y_min), (x_max, y_max), color=color, thick...
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import json def mock_light(): """Mock UniFi Protect Camera device.""" data = json.loads(load_fixture("sample_light.json", integration=DOMAIN)) return Light.from_unifi_dict(**data)
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def randomize_bulge_i(N, M, bp='G', target='none', ligand='theo'): """ Replace the upper stem with the aptamer and randomize the bulge to connect it to the lower stem. This is a variant of the rb library with two small differences. First, the nucleotides flanking the aptamer are not randomized a...
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def JSparser(contents: str) -> str: """ Is supposed to replace URLs in JS. Arguments: contents: JS string Returns: Input JS string """ # TODO: URL replacement return contents
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import logging def parse_identifier(db, identifier): """Parse the identifier and return an Identifier object representing it. :param db: Database session :type db: sqlalchemy.orm.session.Session :param identifier: String containing the identifier :type identifier: str :return: Identifier ob...
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import textwrap def wrap_name(dirname, figsize): """Wrap name to fit in subfig.""" fontsize = plt.rcParams["font.size"] # 1/120 = inches/(fontsize*character) num_chars = int(figsize / fontsize * 72) return textwrap.fill(dirname, num_chars)
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def resolve_shape(tensor, rank=None, scope=None): """Fully resolves the shape of a Tensor. Use as much as possible the shape components already known during graph creation and resolve the remaining ones during runtime. Args: tensor: Input tensor whose shape we query. rank: The rank of the tensor, provi...
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def gradient_clip(gradients, max_gradient_norm): """Clipping gradients of a model.""" clipped_gradients, gradient_norm = tf.clip_by_global_norm( gradients, max_gradient_norm) gradient_norm_summary = [tf.summary.scalar("grad_norm", gradient_norm)] gradient_norm_summary.append( tf.summary.scalar("clip...
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import subprocess def get_sha_from_ref(repo_url, reference): """ Returns the sha corresponding to the reference for a repo :param repo_url: location of the git repository :param reference: reference of the branch :returns: utf-8 encoded string of the SHA found by the git command """ # Using su...
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def list_species(category_id): """ List all the species for the specified category :return: A list of Species instances """ with Session.begin() as session: species = session.query(Species)\ .filter(Species.categoryId == category_id)\ .order_by(db.asc(Species.name))\...
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def get_motif_proteins(meme_db_file): """ Hash motif_id's to protein names using the MEME DB file """ motif_protein = {} for line in open(meme_db_file): a = line.split() if len(a) > 0 and a[0] == 'MOTIF': if a[2][0] == '(': motif_protein[a[1]] = a[2][1:a[2].find(')')] else: mot...
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import os import sys def get_files(search_glob): """ Returns all files matching |search_glob|. """ recursive_glob = '**' + os.path.sep if recursive_glob in search_glob: if sys.version_info >= (3, 5): result = iglob(search_glob, recursive=True) else: # Polyfill for recursive glob pattern matc...
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def pixellate_bboxes(im, bboxes, cell_size=(5,6), expand_per=0.0): """Pixellates ROI using Nearest Neighbor inerpolation :param im: (numpy.ndarray) image BGR :param bbox: (BBox) :param cell_size: (int, int) pixellated cell size :returns (numpy.ndarray) BGR image """ if not bboxes: return im elif not...
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import sys def in_ipython() -> bool: """try to detect whether we are in an ipython shell, e.g., a jupyter notebook""" ipy_module = sys.modules.get("IPython") if ipy_module: return bool(ipy_module.get_ipython()) else: return False
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def StepToGeom_MakeHyperbola2d_Convert(*args): """ :param SC: :type SC: Handle_StepGeom_Hyperbola & :param CC: :type CC: Handle_Geom2d_Hyperbola & :rtype: bool """ return _StepToGeom.StepToGeom_MakeHyperbola2d_Convert(*args)
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def create_dict(local=None, field=None, **kwargs): """ 以字典的形式从局部变量locals()中获取指定的变量 :param local: dict :param field: str[] 指定需要从local中读取的变量名称 :param kwargs: 需要将变量指定额外名称时使用 :return: dict """ if field is None or local is None: return {} result = {k: v for k, v in local.items() ...
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def sum_list_for_datalist(list): """ DB에 저장할 때, 기준일로부터 과거 데이터가 존재하지 않을 경우에는 0을 return 한다. :param list: :return: float or int """ mysum = 0 for i in range(0, len(list)): if list[i] == 0: return 0 mysum = mysum + list[i] return mysum
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def elu(x, alpha=1.): """Exponential linear unit. Arguments: x {tensor} -- Input float tensor to perform activation. alpha {float} -- A scalar, slope of negative section. Returns: tensor -- Output of exponential linear activation """ return x * (x > 0) + alpha * (tf...
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def coalesce(*args): """ Compute the first non-null value(s) from the passed arguments in left-to-right order. This is also known as "combine_first" in pandas. Parameters ---------- *args : variable-length value list Examples -------- >>> import ibis >>> expr1 = None >>> ex...
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import json def get_analysis(poem, operations, rhyme_analysis=False, alternative_output=False): """ View for /analysis that perform an analysis of poem running the different operations on it. :param poem: A UTF-8 encoded byte string with the text of the poem :param operations: List of strings with...
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def get_detail_root(): """ Get the detail storage path in the git project """ return get_root() / '.detail'
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def solve(strs, m, n): """ 2D 0-1 knapsack """ def count(s): m, n = 0, 0 for c in s: if c == "0": m += 1 elif c == "1": n += 1 return m, n dp = [] for _ in range(m + 1): dp.append([0] * (n + 1)) for s ...
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def bk_category_chosen_category(): """Returns chosen category for creating bk_category object.""" return "Bread"
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import math def apply_weights( events, total_num=1214165.85244438, # for chips_1200 nuel_frac=0.00003202064566, # for chips_1200 anuel_frac=0.00000208200747, # for chips_1200 numu_frac=0.00276174709613, # for chips_1200 anumu_frac=0.00006042213136, # for chips_1200 cosmic_frac=0.99714...
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def _pipe_line_with_colons(colwidths, colaligns): """Return a horizontal line with optional colons to indicate column's alignment (as in `pipe` output format).""" segments = [_pipe_segment_with_colons(a, w) for a, w in zip(colaligns, colwidths)] return "|" + "|".join(segments) + "|"
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from datetime import datetime def convert_to_dates(start, end): """ CTD - Convert two strings to datetimes in format 'xx:xx' param start: String - First string to convert param end: String - Second string to convert return: datetime - Two datetimes """ start = datetime.strptime(start, "%H:...
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def flipud(m): """ Flips the entries in each column in the up/down direction. Rows are preserved, but appear in a different order than before. Args: m (Tensor): Input array. Returns: Tensor. Raises: TypeError: If the input is not a tensor. Supported Platforms: ...
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def get_book_url(tool_name, category): """Get the link to the help documentation of the tool. Args: tool_name (str): The name of the tool. category (str): The category of the tool. Returns: str: The URL to help documentation. """ prefix = "https://jblindsay.github.io/wbt_bo...
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import hashlib def game_hash(s): """Generate hash-based identifier for a game account based on the text of the game. """ def int_to_base(n): alphabet = "BCDFGHJKLMNPQRSTVWXYZ" base = len(alphabet) if n < base: return alphabet[n] return int_to_base(n // base)...
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import math def thumbnail_url(bbox, layers, qgis_project, style=None, internal=True): """Internal function to generate the URL for the thumbnail. :param bbox: The bounding box to use in the format [left,bottom,right,top]. :type bbox: list :param layers: Name of the layer to use. :type layers: ba...
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def evaluate_prediction_power(df, num_days=1): """" Applies a shift to the model for the number of days given, default to 1, and feed the data to a linear regression model. Evaluate the results using score and print it. """ scores = {} print "Num days: {}".format(range(num_days)) for...
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def get_select_file_dialog_dir(): """" Return the directory that should be displayed by default in file dialogs. """ directory = CONF.get('main', 'select_file_dialog_dir', get_home_dir()) directory = directory if osp.exists(directory) else get_home_dir() return directory
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import os def get_photo_filesystem_path(photos_basedir, album_name, filename): """ Gets location of photo on filesystem, e.g.: /some/dir/album/photo.jpg :param album_name: :param filename: :return: """ return os.path.join(photos_basedir, get_photo_filesystem_relpath(album_name, filenam...
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import os import imp import random from typing import OrderedDict def getAdminData(self): """ Deliver admin content of module alarms (ajax) :return: rendered template as string or json dict """ if request.args.get('action') == 'upload': if request.files: ufile = request.files[...
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def join_collections(sql_query: sql.SQLQuery) -> QueryExpression: """Join together multiple collections to return their documents in the response. Params: ------- sql_query: SQLQuery object with information about the query params. Returns: -------- An FQL query expression for joined and fi...
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def querylist(query, encoding='utf-8', errors='replace'): """Split the query component into individual `name=value` pairs and return a list of `(name, value)` tuples. """ if query: qsl = [query] else: return [] if isinstance(query, bytes): QUERYSEP = (b';', b'&') ...
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def rotate_space_123(angles): """Returns the direction cosine matrix relating a reference frame B rotated relative to reference frame A through the x, y, then z axes of reference frame A (spaced fixed rotations). Parameters ---------- angles : numpy.array or list or tuple, shape(3,) Thr...
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import logging import os def parse_arguments(): """Parse and return the command line argument dictionary object """ parser = ArgumentParser("CIFAR-10/100 Training") _verbosity = "INFO" parser.add_argument( "-v", "--verbosity", type=str.upper, choices=logging._nameTo...
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def get_tac_resource(url): """ Get the requested resource or update resource using Tacoma account :returns: http response with content in xml """ response = None response = TrumbaTac.getURL(url, {"Accept": "application/xml"}) _log_xml_resp("Tacoma", url, response) return response
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def cosweightlat(darray, lat1, lat2): """Calculate the weighted average for an [:,lat] array over the region lat1 to lat2 """ # flip latitudes if they are decreasing if (darray.lat[0] > darray.lat[darray.lat.size -1]): print("flipping latitudes") darray = darray.sortby('lat') r...
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def _GetSoftMaxResponse(goal_embedding, scene_spatial): """Max response of an embeddings across a spatial feature map. The goal_embedding is multiplied across the spatial dimensions of the scene_spatial to generate a heatmap. Then the spatial softmax-pooled value of this heatmap is returned. If the goal_embedd...
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def summarize_star(star): """return one line summary of star""" if star.find('name').text[-2] == ' ': name = star.find('name').text[-1] else: name = ' ' mass = format_star_mass_str(star) radius = format_star_radius_str(star) temp = format_body_temp_str(star) metallicity = for...
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def to_unicode(text, encoding='utf8', errors='strict'): """Convert a string (bytestring in `encoding` or unicode), to unicode.""" if isinstance(text, unicode): return text return unicode(text, encoding, errors=errors)
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def parse_pipfile(): """Reads package requirements from Pipfile.""" cfg = ConfigParser() cfg.read("Pipfile") dev_packages = [p.strip('"') for p in cfg["dev-packages"]] relevant_packages = [ p.strip('"') for p in cfg["packages"] if "nested-dataclasses" not in p ] return relevant_packa...
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from typing import Mapping def print_dist(d, height=12, pch="o", show_number=False, title=None): """ Printing a figure of given distribution Parameters ---------- d: dict, list a dictionary or a list, contains pairs of: "key" -> "count_value" height: int number of maximum lines f...
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import os import errno def Per_sequence_quality_scores (file_path,output_dire, module): """ Read Per sequence quality scores contents from a fastqc file and parses to output file. Returns a list of data used to plot quality graph. Data and genereted graphs are saved to output directory as pn...
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def count_primes(num): """ Write a function that returns the number of prime numbers that exist up to and including a given number :param num: int :return: int """ count = 0 lower = int(input()) upper = int(input()) for num in range(lower, upper + 1): if num > 1: ...
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def run_experiment(config): """ Run the experiment. Args: config: The configuration dictionary. Returns: The experiment result. """ return None
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def read_notification(notification_id): """Marks a notification as read.""" notification = Notification.query.get_or_404(notification_id) if notification.recipient_email != current_user.email: abort(401) notification.is_read = True db.session.add(notification) db.session.commit() ret...
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def grayscale_blur(image): """ Convert image to gray and blur it. """ image_gray = cv.cvtColor(image, cv.COLOR_BGR2GRAY) image_gray = cv.blur(image_gray, (3, 3)) return image_gray
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import hmac def calculate_stream_hmac(stream, hmac_key): """Calculate a stream's HMAC code with the given key.""" stream.seek(0) hash_hmac = hmac.new(bytearray(hmac_key, "utf-8"), digestmod=HASH_FUNCTION) while True: buf = stream.read(4096) if not buf: break hash_hm...
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import os def find(name, dir_path="." , p="r"): """ find(name: string, dirpath="." , p="r") name: the name to find dirpath: find in this directory p = r recursive find sub dirs """ files = ls(dir_path, p) ans = [] for fn in files: head, tail = os.path.sp...
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import re def convert_tac(ThreeAddressCode): """Reads three adress code generated from parser and converts to TAC for codegen; generates the three_addr_code along with leaders; populates generate symbol table as per three_addr_code""" for i in range(ThreeAddressCode.length()): three_addr_inst...
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def is_english_score(bigrams, word): """Calculate the score of a word.""" prob = 1 for w1, w2 in zip("!" + word, word + "!"): bigram = f"{w1}{w2}" if bigram in bigrams: prob *= bigrams[bigram] # / float(bigrams['total'] + 1) else: print("%s not found" % bigra...
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def cat(fname, fallback=_DEFAULT, binary=True): """Return file content. fallback: the value returned in case the file does not exist or cannot be read binary: whether to open the file in binary or text mode. """ try: with open_binary(fname) if binary else open_text(fname) as f:...
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import os import json def _get_from_url(url): """ Note: url is in format like this(following OQMD RESTful API) and the result format should be set to json: http://oqmd.org/oqmdapi/formationenergy?fields=name,entry_id,delta_e&filter=stability=0&format=json Namely url should be in the form sup...
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import codecs def createStringObject(string): """ Given a string (either a ``str`` or ``unicode``), create a :class:`ByteStringObject<ByteStringObject>` or a :class:`TextStringObject<TextStringObject>` to represent the string. """ if isinstance(string, string_type): return TextStringOb...
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import win32com.client def _get_windows_network_adapters(): """Get the list of windows network adapters.""" wbem_locator = win32com.client.Dispatch('WbemScripting.SWbemLocator') wbem_service = wbem_locator.ConnectServer('.', 'root\cimv2') wbem_network_adapters = wbem_service.InstancesOf('Win32_Network...
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def project(dim, states): """Qiskit wrapper of projection operator. """ ket, bra = states if ket in range(dim) and bra in range(dim): return st.basis(dim, ket) * st.basis(dim, bra).dag() else: raise Exception('States are specified on the outside of Hilbert space %s' % states)
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def check_service_status(ssh_conn_obj, service_name, status="running", device='server'): """ Author: Chaitanya Vella ([email protected]) Function to check the service status :param ssh_conn_obj: :param service_name: :param status: :return: """ st.log("##### Checking ...
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def _persist_block(block_node, block_map): """produce persistent binary data for a single block Children block are assumed to be already persisted and present in block_map. """ data = tuple(_to_value(v, block_map) for v in block_node) return S_BLOCK.pack(*data)
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