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trustar/trustar-python
trustar/utils.py
normalize_timestamp
def normalize_timestamp(date_time): """ TODO: get rid of this function and all references to it / uses of it. Attempt to convert a string timestamp in to a TruSTAR compatible format for submission. Will return current time with UTC time zone if None :param date_time: int that is seconds or milliseco...
python
def normalize_timestamp(date_time): """ TODO: get rid of this function and all references to it / uses of it. Attempt to convert a string timestamp in to a TruSTAR compatible format for submission. Will return current time with UTC time zone if None :param date_time: int that is seconds or milliseco...
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/utils.py#L17-L70
trustar/trustar-python
trustar/utils.py
parse_boolean
def parse_boolean(value): """ Coerce a value to boolean. :param value: the value, could be a string, boolean, or None :return: the value as coerced to a boolean """ if value is None: return None if isinstance(value, bool): return value if isinstance(value, string_type...
python
def parse_boolean(value): """ Coerce a value to boolean. :param value: the value, could be a string, boolean, or None :return: the value as coerced to a boolean """ if value is None: return None if isinstance(value, bool): return value if isinstance(value, string_type...
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/utils.py#L117-L138
trustar/trustar-python
trustar/trustar.py
TruStar.config_from_file
def config_from_file(config_file_path, config_role): """ Create a configuration dictionary from a config file section. This dictionary is what the TruStar class constructor ultimately requires. :param config_file_path: The path to the config file. :param config_role: The sectio...
python
def config_from_file(config_file_path, config_role): """ Create a configuration dictionary from a config file section. This dictionary is what the TruStar class constructor ultimately requires. :param config_file_path: The path to the config file. :param config_role: The sectio...
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/trustar.py#L213-L257
trustar/trustar-python
trustar/trustar.py
TruStar.get_version
def get_version(self): """ Get the version number of the API. Example: >>> ts.get_version() 1.3 """ result = self._client.get("version").content if isinstance(result, bytes): result = result.decode('utf-8') return result.strip('\n'...
python
def get_version(self): """ Get the version number of the API. Example: >>> ts.get_version() 1.3 """ result = self._client.get("version").content if isinstance(result, bytes): result = result.decode('utf-8') return result.strip('\n'...
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/trustar.py#L284-L299
trustar/trustar-python
trustar/trustar.py
TruStar.get_user_enclaves
def get_user_enclaves(self): """ Gets the list of enclaves that the user has access to. :return: A list of |EnclavePermissions| objects, each representing an enclave and whether the requesting user has read, create, and update access to it. """ resp = self._client.g...
python
def get_user_enclaves(self): """ Gets the list of enclaves that the user has access to. :return: A list of |EnclavePermissions| objects, each representing an enclave and whether the requesting user has read, create, and update access to it. """ resp = self._client.g...
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Gets the list of enclaves that the user has access to. :return: A list of |EnclavePermissions| objects, each representing an enclave and whether the requesting user has read, create, and update access to it.
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https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/trustar.py#L301-L310
trustar/trustar-python
trustar/trustar.py
TruStar.get_request_quotas
def get_request_quotas(self): """ Gets the request quotas for the user's company. :return: A list of |RequestQuota| objects. """ resp = self._client.get("request-quotas") return [RequestQuota.from_dict(quota) for quota in resp.json()]
python
def get_request_quotas(self): """ Gets the request quotas for the user's company. :return: A list of |RequestQuota| objects. """ resp = self._client.get("request-quotas") return [RequestQuota.from_dict(quota) for quota in resp.json()]
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/trustar.py#L312-L320
trustar/trustar-python
trustar/logger.py
configure_logging
def configure_logging(): """ Initialize logging configuration to defaults. If the environment variable DISABLE_TRUSTAR_LOGGING is set to true, this will be ignored. """ if not parse_boolean(os.environ.get('DISABLE_TRUSTAR_LOGGING')): # configure dictConfig(DEFAULT_LOGGING_CONFIG) ...
python
def configure_logging(): """ Initialize logging configuration to defaults. If the environment variable DISABLE_TRUSTAR_LOGGING is set to true, this will be ignored. """ if not parse_boolean(os.environ.get('DISABLE_TRUSTAR_LOGGING')): # configure dictConfig(DEFAULT_LOGGING_CONFIG) ...
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Initialize logging configuration to defaults. If the environment variable DISABLE_TRUSTAR_LOGGING is set to true, this will be ignored.
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/logger.py#L73-L92
trustar/trustar-python
trustar/models/enclave.py
Enclave.from_dict
def from_dict(cls, enclave): """ Create a enclave object from a dictionary. :param enclave: The dictionary. :return: The enclave object. """ return Enclave(id=enclave.get('id'), name=enclave.get('name'), type=EnclaveType.fro...
python
def from_dict(cls, enclave): """ Create a enclave object from a dictionary. :param enclave: The dictionary. :return: The enclave object. """ return Enclave(id=enclave.get('id'), name=enclave.get('name'), type=EnclaveType.fro...
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/models/enclave.py#L34-L44
trustar/trustar-python
trustar/models/enclave.py
Enclave.to_dict
def to_dict(self, remove_nones=False): """ Creates a dictionary representation of the enclave. :param remove_nones: Whether ``None`` values should be filtered out of the dictionary. Defaults to ``False``. :return: A dictionary representation of the enclave. """ if remo...
python
def to_dict(self, remove_nones=False): """ Creates a dictionary representation of the enclave. :param remove_nones: Whether ``None`` values should be filtered out of the dictionary. Defaults to ``False``. :return: A dictionary representation of the enclave. """ if remo...
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/models/enclave.py#L46-L61
trustar/trustar-python
trustar/models/enclave.py
EnclavePermissions.from_dict
def from_dict(cls, d): """ Create a enclave object from a dictionary. :param d: The dictionary. :return: The EnclavePermissions object. """ enclave = super(cls, EnclavePermissions).from_dict(d) enclave_permissions = cls.from_enclave(enclave) enclave_per...
python
def from_dict(cls, d): """ Create a enclave object from a dictionary. :param d: The dictionary. :return: The EnclavePermissions object. """ enclave = super(cls, EnclavePermissions).from_dict(d) enclave_permissions = cls.from_enclave(enclave) enclave_per...
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/models/enclave.py#L87-L102
trustar/trustar-python
trustar/models/enclave.py
EnclavePermissions.to_dict
def to_dict(self, remove_nones=False): """ Creates a dictionary representation of the enclave. :param remove_nones: Whether ``None`` values should be filtered out of the dictionary. Defaults to ``False``. :return: A dictionary representation of the EnclavePermissions object. ""...
python
def to_dict(self, remove_nones=False): """ Creates a dictionary representation of the enclave. :param remove_nones: Whether ``None`` values should be filtered out of the dictionary. Defaults to ``False``. :return: A dictionary representation of the EnclavePermissions object. ""...
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https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/models/enclave.py#L104-L120
trustar/trustar-python
trustar/models/enclave.py
EnclavePermissions.from_enclave
def from_enclave(cls, enclave): """ Create an |EnclavePermissions| object from an |Enclave| object. :param enclave: the Enclave object :return: an EnclavePermissions object """ return EnclavePermissions(id=enclave.id, name=enclave.name,...
python
def from_enclave(cls, enclave): """ Create an |EnclavePermissions| object from an |Enclave| object. :param enclave: the Enclave object :return: an EnclavePermissions object """ return EnclavePermissions(id=enclave.id, name=enclave.name,...
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train
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trustar/trustar-python
trustar/tag_client.py
TagClient.get_enclave_tags
def get_enclave_tags(self, report_id, id_type=None): """ Retrieves all enclave tags present in a specific report. :param report_id: the ID of the report :param id_type: indicates whether the ID internal or an external ID provided by the user :return: A list of |Tag| objects. ...
python
def get_enclave_tags(self, report_id, id_type=None): """ Retrieves all enclave tags present in a specific report. :param report_id: the ID of the report :param id_type: indicates whether the ID internal or an external ID provided by the user :return: A list of |Tag| objects. ...
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Retrieves all enclave tags present in a specific report. :param report_id: the ID of the report :param id_type: indicates whether the ID internal or an external ID provided by the user :return: A list of |Tag| objects.
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/tag_client.py#L20-L31
trustar/trustar-python
trustar/tag_client.py
TagClient.add_enclave_tag
def add_enclave_tag(self, report_id, name, enclave_id, id_type=None): """ Adds a tag to a specific report, for a specific enclave. :param report_id: The ID of the report :param name: The name of the tag to be added :param enclave_id: ID of the enclave where the tag will be added...
python
def add_enclave_tag(self, report_id, name, enclave_id, id_type=None): """ Adds a tag to a specific report, for a specific enclave. :param report_id: The ID of the report :param name: The name of the tag to be added :param enclave_id: ID of the enclave where the tag will be added...
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Adds a tag to a specific report, for a specific enclave. :param report_id: The ID of the report :param name: The name of the tag to be added :param enclave_id: ID of the enclave where the tag will be added :param id_type: indicates whether the ID internal or an external ID provided by t...
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/tag_client.py#L33-L50
trustar/trustar-python
trustar/tag_client.py
TagClient.delete_enclave_tag
def delete_enclave_tag(self, report_id, tag_id, id_type=None): """ Deletes a tag from a specific report, in a specific enclave. :param string report_id: The ID of the report :param string tag_id: ID of the tag to delete :param string id_type: indicates whether the ID internal or...
python
def delete_enclave_tag(self, report_id, tag_id, id_type=None): """ Deletes a tag from a specific report, in a specific enclave. :param string report_id: The ID of the report :param string tag_id: ID of the tag to delete :param string id_type: indicates whether the ID internal or...
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Deletes a tag from a specific report, in a specific enclave. :param string report_id: The ID of the report :param string tag_id: ID of the tag to delete :param string id_type: indicates whether the ID internal or an external ID provided by the user :return: The response body.
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/tag_client.py#L52-L65
trustar/trustar-python
trustar/tag_client.py
TagClient.get_all_enclave_tags
def get_all_enclave_tags(self, enclave_ids=None): """ Retrieves all tags present in the given enclaves. If the enclave list is empty, the tags returned include all tags for all enclaves the user has access to. :param (string) list enclave_ids: list of enclave IDs :return: The li...
python
def get_all_enclave_tags(self, enclave_ids=None): """ Retrieves all tags present in the given enclaves. If the enclave list is empty, the tags returned include all tags for all enclaves the user has access to. :param (string) list enclave_ids: list of enclave IDs :return: The li...
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Retrieves all tags present in the given enclaves. If the enclave list is empty, the tags returned include all tags for all enclaves the user has access to. :param (string) list enclave_ids: list of enclave IDs :return: The list of |Tag| objects.
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/tag_client.py#L67-L78
trustar/trustar-python
trustar/tag_client.py
TagClient.add_indicator_tag
def add_indicator_tag(self, indicator_value, name, enclave_id): """ Adds a tag to a specific indicator, for a specific enclave. :param indicator_value: The value of the indicator :param name: The name of the tag to be added :param enclave_id: ID of the enclave where the tag will...
python
def add_indicator_tag(self, indicator_value, name, enclave_id): """ Adds a tag to a specific indicator, for a specific enclave. :param indicator_value: The value of the indicator :param name: The name of the tag to be added :param enclave_id: ID of the enclave where the tag will...
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Adds a tag to a specific indicator, for a specific enclave. :param indicator_value: The value of the indicator :param name: The name of the tag to be added :param enclave_id: ID of the enclave where the tag will be added :return: A |Tag| object representing the tag that was created.
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/tag_client.py#L95-L114
trustar/trustar-python
trustar/tag_client.py
TagClient.delete_indicator_tag
def delete_indicator_tag(self, indicator_value, tag_id): """ Deletes a tag from a specific indicator, in a specific enclave. :param indicator_value: The value of the indicator to delete the tag from :param tag_id: ID of the tag to delete """ params = { 'valu...
python
def delete_indicator_tag(self, indicator_value, tag_id): """ Deletes a tag from a specific indicator, in a specific enclave. :param indicator_value: The value of the indicator to delete the tag from :param tag_id: ID of the tag to delete """ params = { 'valu...
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Deletes a tag from a specific indicator, in a specific enclave. :param indicator_value: The value of the indicator to delete the tag from :param tag_id: ID of the tag to delete
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/tag_client.py#L116-L128
trustar/trustar-python
trustar/models/tag.py
Tag.from_dict
def from_dict(cls, tag): """ Create a tag object from a dictionary. This method is intended for internal use, to construct a :class:`Tag` object from the body of a response json. It expects the keys of the dictionary to match those of the json that would be found in a response to an AP...
python
def from_dict(cls, tag): """ Create a tag object from a dictionary. This method is intended for internal use, to construct a :class:`Tag` object from the body of a response json. It expects the keys of the dictionary to match those of the json that would be found in a response to an AP...
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train
https://github.com/trustar/trustar-python/blob/707d51adc58d68aed7de12a4ca37949cb75cf122/trustar/models/tag.py#L34-L46
trustar/trustar-python
trustar/models/tag.py
Tag.to_dict
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python
def to_dict(self, remove_nones=False): """ Creates a dictionary representation of the tag. :param remove_nones: Whether ``None`` values should be filtered out of the dictionary. Defaults to ``False``. :return: A dictionary representation of the tag. """ if remove_nones...
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train
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openvax/topiary
topiary/rna/common.py
infer_delimiter
def infer_delimiter(filename, comment_char="#", n_lines=3): """ Given a file which contains data separated by one of the following: - commas - tabs - spaces Return the most likely separator by sniffing the first few lines of the file's contents. """ lines = [] with op...
python
def infer_delimiter(filename, comment_char="#", n_lines=3): """ Given a file which contains data separated by one of the following: - commas - tabs - spaces Return the most likely separator by sniffing the first few lines of the file's contents. """ lines = [] with op...
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openvax/topiary
topiary/rna/common.py
check_required_columns
def check_required_columns(df, filename, required_columns): """ Ensure that all required columns are present in the given dataframe, otherwise raise an exception. """ available_columns = set(df.columns) for column_name in required_columns: if column_name not in available_columns: ...
python
def check_required_columns(df, filename, required_columns): """ Ensure that all required columns are present in the given dataframe, otherwise raise an exception. """ available_columns = set(df.columns) for column_name in required_columns: if column_name not in available_columns: ...
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gabrielelanaro/chemview
chemview/contrib.py
topology_mdtraj
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python
def topology_mdtraj(traj): '''Generate topology spec for the MolecularViewer from mdtraj. :param mdtraj.Trajectory traj: the trajectory :return: A chemview-compatible dictionary corresponding to the topology defined in mdtraj. ''' import mdtraj as md top = {} top['atom_types'] = [a.elemen...
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gabrielelanaro/chemview
chemview/utils.py
encode_numpy
def encode_numpy(array): '''Encode a numpy array as a base64 encoded string, to be JSON serialized. :return: a dictionary containing the fields: - *data*: the base64 string - *type*: the array type - *shape*: the array shape ''' return {'data' : base64....
python
def encode_numpy(array): '''Encode a numpy array as a base64 encoded string, to be JSON serialized. :return: a dictionary containing the fields: - *data*: the base64 string - *type*: the array type - *shape*: the array shape ''' return {'data' : base64....
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train
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openvax/topiary
topiary/rna/cufflinks.py
load_cufflinks_dataframe
def load_cufflinks_dataframe( filename, id_column=ID_COLUMN, fpkm_column=FPKM_COLUMN, status_column=STATUS_COLUMN, locus_column=LOCUS_COLUMN, gene_names_column=GENE_NAMES_COLUMN, drop_failed=True, drop_lowdata=False, drop_hidata=True, repla...
python
def load_cufflinks_dataframe( filename, id_column=ID_COLUMN, fpkm_column=FPKM_COLUMN, status_column=STATUS_COLUMN, locus_column=LOCUS_COLUMN, gene_names_column=GENE_NAMES_COLUMN, drop_failed=True, drop_lowdata=False, drop_hidata=True, repla...
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Loads a Cufflinks tracking file, which contains expression levels (in FPKM: Fragments Per Kilobase of transcript per Million fragments) for transcript isoforms or whole genes. These transcripts/genes may be previously known (in which case they have an Ensembl ID) or a novel assembly from the RNA-Seq dat...
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openvax/topiary
topiary/rna/cufflinks.py
load_cufflinks_dict
def load_cufflinks_dict(*args, **kwargs): """ Returns dictionary mapping feature identifier (either transcript or gene ID) to a DataFrame row with fields: id : str novel : bool fpkm : float chr : str start : int end : int gene_names : str list """ ...
python
def load_cufflinks_dict(*args, **kwargs): """ Returns dictionary mapping feature identifier (either transcript or gene ID) to a DataFrame row with fields: id : str novel : bool fpkm : float chr : str start : int end : int gene_names : str list """ ...
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openvax/topiary
topiary/rna/cufflinks.py
load_cufflinks_fpkm_dict
def load_cufflinks_fpkm_dict(*args, **kwargs): """ Returns dictionary mapping feature identifier (either transcript or gene ID) to FPKM expression value. """ return { row.id: row.fpkm for (_, row) in load_cufflinks_dataframe(*args, **kwargs).iterrows() }
python
def load_cufflinks_fpkm_dict(*args, **kwargs): """ Returns dictionary mapping feature identifier (either transcript or gene ID) to FPKM expression value. """ return { row.id: row.fpkm for (_, row) in load_cufflinks_dataframe(*args, **kwargs).iterrows() }
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gabrielelanaro/chemview
chemview/install.py
enable_notebook
def enable_notebook(verbose=0): """Enable IPython notebook widgets to be displayed. This function should be called before using the chemview widgets. """ libs = ['objexporter.js', 'ArcballControls.js', 'filesaver.js', 'base64-arraybuffer.js', 'context.js', 'chemview....
python
def enable_notebook(verbose=0): """Enable IPython notebook widgets to be displayed. This function should be called before using the chemview widgets. """ libs = ['objexporter.js', 'ArcballControls.js', 'filesaver.js', 'base64-arraybuffer.js', 'context.js', 'chemview....
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Enable IPython notebook widgets to be displayed. This function should be called before using the chemview widgets.
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train
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trustar/trustar-python
trustar/examples/bulk_upload.py
extract_pdf
def extract_pdf(file_name): """ Extract text from a pdf file :param file_name path to pdf to read :return text from pdf """ rsrcmgr = pdfminer.pdfinterp.PDFResourceManager() sio = StringIO() laparams = LAParams() device = TextConverter(rsrcmgr, sio, codec='utf-8', laparams=laparams)...
python
def extract_pdf(file_name): """ Extract text from a pdf file :param file_name path to pdf to read :return text from pdf """ rsrcmgr = pdfminer.pdfinterp.PDFResourceManager() sio = StringIO() laparams = LAParams() device = TextConverter(rsrcmgr, sio, codec='utf-8', laparams=laparams)...
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trustar/trustar-python
trustar/examples/bulk_upload.py
process_file
def process_file(source_file): """ Extract text from a file (pdf, txt, eml, csv, json) :param source_file path to file to read :return text from file """ if source_file.endswith(('.pdf', '.PDF')): txt = extract_pdf(source_file) elif source_file.endswith(('.txt', '.eml', '.csv', '.jso...
python
def process_file(source_file): """ Extract text from a file (pdf, txt, eml, csv, json) :param source_file path to file to read :return text from file """ if source_file.endswith(('.pdf', '.PDF')): txt = extract_pdf(source_file) elif source_file.endswith(('.txt', '.eml', '.csv', '.jso...
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trustar/trustar-python
trustar/models/enum.py
Enum.from_string
def from_string(cls, string): """ Simply logs a warning if the desired enum value is not found. :param string: :return: """ # find enum value for attr in dir(cls): value = getattr(cls, attr) if value == string: return valu...
python
def from_string(cls, string): """ Simply logs a warning if the desired enum value is not found. :param string: :return: """ # find enum value for attr in dir(cls): value = getattr(cls, attr) if value == string: return valu...
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valohai/valohai-yaml
valohai_yaml/objs/parameter.py
Parameter.validate
def validate(self, value): """ Validate (and possibly typecast) the given parameter value value. :param value: Parameter value :return: Typecast parameter value :raises ValidationErrors: if there were validation errors """ errors = [] value = self._valida...
python
def validate(self, value): """ Validate (and possibly typecast) the given parameter value value. :param value: Parameter value :return: Typecast parameter value :raises ValidationErrors: if there were validation errors """ errors = [] value = self._valida...
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valohai/valohai-yaml
valohai_yaml/objs/parameter.py
Parameter.format_cli
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python
def format_cli(self, value): """ Build a single parameter argument. :return: list of CLI strings -- not escaped. If the parameter should not be expressed, returns None. :rtype: list[str]|None """ if value is None or (self.type == 'flag' and not value): return...
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valohai/valohai-yaml
valohai_yaml/utils/__init__.py
listify
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python
def listify(value): """ Wrap the given value into a list, with the below provisions: * If the value is a list or a tuple, it's coerced into a new list. * If the value is None, an empty list is returned. * Otherwise, a single-element list is returned, containing the value. :param value: A value...
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valohai/valohai-yaml
valohai_yaml/commands.py
build_command
def build_command(command, parameter_map): """ Build command line(s) using the given parameter map. Even if the passed a single `command`, this function will return a list of shell commands. It is the caller's responsibility to concatenate them, likely using the semicolon or double ampersands. ...
python
def build_command(command, parameter_map): """ Build command line(s) using the given parameter map. Even if the passed a single `command`, this function will return a list of shell commands. It is the caller's responsibility to concatenate them, likely using the semicolon or double ampersands. ...
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valohai/valohai-yaml
valohai_yaml/validation.py
validate
def validate(yaml, raise_exc=True): """ Validate the given YAML document and return a list of errors. :param yaml: YAML data (either a string, a stream, or pre-parsed Python dict/list) :type yaml: list|dict|str|file :param raise_exc: Whether to raise a meta-exception containing all discovered error...
python
def validate(yaml, raise_exc=True): """ Validate the given YAML document and return a list of errors. :param yaml: YAML data (either a string, a stream, or pre-parsed Python dict/list) :type yaml: list|dict|str|file :param raise_exc: Whether to raise a meta-exception containing all discovered error...
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valohai/valohai-yaml
valohai_yaml/objs/parameter_map.py
ParameterMap.build_parameters
def build_parameters(self): """ Build the CLI command line from the parameter values. :return: list of CLI strings -- not escaped! :rtype: list[str] """ param_bits = [] for name in self.parameters: param_bits.extend(self.build_parameter_by_name(name) ...
python
def build_parameters(self): """ Build the CLI command line from the parameter values. :return: list of CLI strings -- not escaped! :rtype: list[str] """ param_bits = [] for name in self.parameters: param_bits.extend(self.build_parameter_by_name(name) ...
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Build the CLI command line from the parameter values. :return: list of CLI strings -- not escaped! :rtype: list[str]
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train
https://github.com/valohai/valohai-yaml/blob/3d2e92381633d84cdba039f6905df34c9633a2e1/valohai_yaml/objs/parameter_map.py#L6-L16
valohai/valohai-yaml
valohai_yaml/objs/config.py
Config.parse
def parse(cls, data): """ Parse a Config structure out of a Python dict (that's likely deserialized from YAML). :param data: Config-y dict :type data: dict :return: Config object :rtype: valohai_yaml.objs.Config """ parsers = { 'step': ([], St...
python
def parse(cls, data): """ Parse a Config structure out of a Python dict (that's likely deserialized from YAML). :param data: Config-y dict :type data: dict :return: Config object :rtype: valohai_yaml.objs.Config """ parsers = { 'step': ([], St...
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train
https://github.com/valohai/valohai-yaml/blob/3d2e92381633d84cdba039f6905df34c9633a2e1/valohai_yaml/objs/config.py#L24-L50
valohai/valohai-yaml
valohai_yaml/objs/config.py
Config.get_step_by
def get_step_by(self, **kwargs): """ Get the first step that matches all the passed named arguments. Has special argument index not present in the real step. Usage: config.get_step_by(name='not found') config.get_step_by(index=0) config.get_step_by(n...
python
def get_step_by(self, **kwargs): """ Get the first step that matches all the passed named arguments. Has special argument index not present in the real step. Usage: config.get_step_by(name='not found') config.get_step_by(index=0) config.get_step_by(n...
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Get the first step that matches all the passed named arguments. Has special argument index not present in the real step. Usage: config.get_step_by(name='not found') config.get_step_by(index=0) config.get_step_by(name="greeting", command='echo HELLO MORDOR') ...
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train
https://github.com/valohai/valohai-yaml/blob/3d2e92381633d84cdba039f6905df34c9633a2e1/valohai_yaml/objs/config.py#L65-L87
valohai/valohai-yaml
valohai_yaml/parsing.py
parse
def parse(yaml, validate=True): """ Parse the given YAML data into a `Config` object, optionally validating it first. :param yaml: YAML data (either a string, a stream, or pre-parsed Python dict/list) :type yaml: list|dict|str|file :param validate: Whether to validate the data before attempting to ...
python
def parse(yaml, validate=True): """ Parse the given YAML data into a `Config` object, optionally validating it first. :param yaml: YAML data (either a string, a stream, or pre-parsed Python dict/list) :type yaml: list|dict|str|file :param validate: Whether to validate the data before attempting to ...
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Parse the given YAML data into a `Config` object, optionally validating it first. :param yaml: YAML data (either a string, a stream, or pre-parsed Python dict/list) :type yaml: list|dict|str|file :param validate: Whether to validate the data before attempting to parse it. :type validate: bool :retu...
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train
https://github.com/valohai/valohai-yaml/blob/3d2e92381633d84cdba039f6905df34c9633a2e1/valohai_yaml/parsing.py#L6-L21
valohai/valohai-yaml
valohai_yaml/objs/step.py
Step.get_parameter_defaults
def get_parameter_defaults(self, include_flags=True): """ Get a dict mapping parameter names to their defaults (if set). :rtype: dict[str, object] """ return { name: parameter.default for (name, parameter) in self.parameters.items() ...
python
def get_parameter_defaults(self, include_flags=True): """ Get a dict mapping parameter names to their defaults (if set). :rtype: dict[str, object] """ return { name: parameter.default for (name, parameter) in self.parameters.items() ...
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Get a dict mapping parameter names to their defaults (if set). :rtype: dict[str, object]
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train
https://github.com/valohai/valohai-yaml/blob/3d2e92381633d84cdba039f6905df34c9633a2e1/valohai_yaml/objs/step.py#L76-L86
valohai/valohai-yaml
valohai_yaml/objs/step.py
Step.build_command
def build_command(self, parameter_values, command=None): """ Build the command for this step using the given parameter values. Even if the original configuration only declared a single `command`, this function will return a list of shell commands. It is the caller's responsibil...
python
def build_command(self, parameter_values, command=None): """ Build the command for this step using the given parameter values. Even if the original configuration only declared a single `command`, this function will return a list of shell commands. It is the caller's responsibil...
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train
https://github.com/valohai/valohai-yaml/blob/3d2e92381633d84cdba039f6905df34c9633a2e1/valohai_yaml/objs/step.py#L92-L118
valohai/valohai-yaml
valohai_yaml/lint.py
lint_file
def lint_file(file_path): """ Validate & lint `file_path` and return a LintResult. :param file_path: YAML filename :type file_path: str :return: LintResult object """ with open(file_path, 'r') as yaml: try: return lint(yaml) except Exception as e: lr...
python
def lint_file(file_path): """ Validate & lint `file_path` and return a LintResult. :param file_path: YAML filename :type file_path: str :return: LintResult object """ with open(file_path, 'r') as yaml: try: return lint(yaml) except Exception as e: lr...
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Validate & lint `file_path` and return a LintResult. :param file_path: YAML filename :type file_path: str :return: LintResult object
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train
https://github.com/valohai/valohai-yaml/blob/3d2e92381633d84cdba039f6905df34c9633a2e1/valohai_yaml/lint.py#L35-L50
metglobal/django-exchange
exchange/adapters/__init__.py
BaseAdapter.update
def update(self): """Actual update process goes here using auxialary ``get_currencies`` and ``get_exchangerates`` methods. This method creates or updates corresponding ``Currency`` and ``ExchangeRate`` models """ currencies = self.get_currencies() currency_objects = {} ...
python
def update(self): """Actual update process goes here using auxialary ``get_currencies`` and ``get_exchangerates`` methods. This method creates or updates corresponding ``Currency`` and ``ExchangeRate`` models """ currencies = self.get_currencies() currency_objects = {} ...
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Actual update process goes here using auxialary ``get_currencies`` and ``get_exchangerates`` methods. This method creates or updates corresponding ``Currency`` and ``ExchangeRate`` models
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train
https://github.com/metglobal/django-exchange/blob/2133593885e02f42a4ed2ed4be2763c4777a1245/exchange/adapters/__init__.py#L17-L63
ManiacalLabs/PixelWeb
pixelweb/bottle.py
_re_flatten
def _re_flatten(p): ''' Turn all capturing groups in a regular expression pattern into non-capturing groups. ''' if '(' not in p: return p return re.sub(r'(\\*)(\(\?P<[^>]+>|\((?!\?))', lambda m: m.group(0) if len(m.group(1)) % 2 else m.group(1) + '(?:', p)
python
def _re_flatten(p): ''' Turn all capturing groups in a regular expression pattern into non-capturing groups. ''' if '(' not in p: return p return re.sub(r'(\\*)(\(\?P<[^>]+>|\((?!\?))', lambda m: m.group(0) if len(m.group(1)) % 2 else m.group(1) + '(?:', p)
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Turn all capturing groups in a regular expression pattern into non-capturing groups.
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L247-L252
ManiacalLabs/PixelWeb
pixelweb/bottle.py
redirect
def redirect(url, code=None): """ Aborts execution and causes a 303 or 302 redirect, depending on the HTTP protocol version. """ if not code: code = 303 if request.get('SERVER_PROTOCOL') == "HTTP/1.1" else 302 res = response.copy(cls=HTTPResponse) res.status = code res.body = "" ...
python
def redirect(url, code=None): """ Aborts execution and causes a 303 or 302 redirect, depending on the HTTP protocol version. """ if not code: code = 303 if request.get('SERVER_PROTOCOL') == "HTTP/1.1" else 302 res = response.copy(cls=HTTPResponse) res.status = code res.body = "" ...
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Aborts execution and causes a 303 or 302 redirect, depending on the HTTP protocol version.
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L2413-L2422
ManiacalLabs/PixelWeb
pixelweb/bottle.py
_file_iter_range
def _file_iter_range(fp, offset, bytes, maxread=1024*1024): ''' Yield chunks from a range in a file. No chunk is bigger than maxread.''' fp.seek(offset) while bytes > 0: part = fp.read(min(bytes, maxread)) if not part: break bytes -= len(part) yield part
python
def _file_iter_range(fp, offset, bytes, maxread=1024*1024): ''' Yield chunks from a range in a file. No chunk is bigger than maxread.''' fp.seek(offset) while bytes > 0: part = fp.read(min(bytes, maxread)) if not part: break bytes -= len(part) yield part
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train
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ManiacalLabs/PixelWeb
pixelweb/bottle.py
static_file
def static_file(filename, root, mimetype='auto', download=False, charset='UTF-8'): """ Open a file in a safe way and return :exc:`HTTPResponse` with status code 200, 305, 403 or 404. The ``Content-Type``, ``Content-Encoding``, ``Content-Length`` and ``Last-Modified`` headers are set if possible. ...
python
def static_file(filename, root, mimetype='auto', download=False, charset='UTF-8'): """ Open a file in a safe way and return :exc:`HTTPResponse` with status code 200, 305, 403 or 404. The ``Content-Type``, ``Content-Encoding``, ``Content-Length`` and ``Last-Modified`` headers are set if possible. ...
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train
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ManiacalLabs/PixelWeb
pixelweb/bottle.py
debug
def debug(mode=True): """ Change the debug level. There is only one debug level supported at the moment.""" global DEBUG if mode: warnings.simplefilter('default') DEBUG = bool(mode)
python
def debug(mode=True): """ Change the debug level. There is only one debug level supported at the moment.""" global DEBUG if mode: warnings.simplefilter('default') DEBUG = bool(mode)
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ManiacalLabs/PixelWeb
pixelweb/bottle.py
parse_auth
def parse_auth(header): """ Parse rfc2617 HTTP authentication header string (basic) and return (user,pass) tuple or None""" try: method, data = header.split(None, 1) if method.lower() == 'basic': user, pwd = touni(base64.b64decode(tob(data))).split(':',1) return user, pwd...
python
def parse_auth(header): """ Parse rfc2617 HTTP authentication header string (basic) and return (user,pass) tuple or None""" try: method, data = header.split(None, 1) if method.lower() == 'basic': user, pwd = touni(base64.b64decode(tob(data))).split(':',1) return user, pwd...
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Parse rfc2617 HTTP authentication header string (basic) and return (user,pass) tuple or None
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ManiacalLabs/PixelWeb
pixelweb/bottle.py
parse_range_header
def parse_range_header(header, maxlen=0): ''' Yield (start, end) ranges parsed from a HTTP Range header. Skip unsatisfiable ranges. The end index is non-inclusive.''' if not header or header[:6] != 'bytes=': return ranges = [r.split('-', 1) for r in header[6:].split(',') if '-' in r] for start, ...
python
def parse_range_header(header, maxlen=0): ''' Yield (start, end) ranges parsed from a HTTP Range header. Skip unsatisfiable ranges. The end index is non-inclusive.''' if not header or header[:6] != 'bytes=': return ranges = [r.split('-', 1) for r in header[6:].split(',') if '-' in r] for start, ...
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Yield (start, end) ranges parsed from a HTTP Range header. Skip unsatisfiable ranges. The end index is non-inclusive.
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train
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ManiacalLabs/PixelWeb
pixelweb/bottle.py
auth_basic
def auth_basic(check, realm="private", text="Access denied"): ''' Callback decorator to require HTTP auth (basic). TODO: Add route(check_auth=...) parameter. ''' def decorator(func): def wrapper(*a, **ka): user, password = request.auth or (None, None) if user is None or n...
python
def auth_basic(check, realm="private", text="Access denied"): ''' Callback decorator to require HTTP auth (basic). TODO: Add route(check_auth=...) parameter. ''' def decorator(func): def wrapper(*a, **ka): user, password = request.auth or (None, None) if user is None or n...
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Callback decorator to require HTTP auth (basic). TODO: Add route(check_auth=...) parameter.
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train
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ManiacalLabs/PixelWeb
pixelweb/bottle.py
view
def view(tpl_name, **defaults): ''' Decorator: renders a template for a handler. The handler can control its behavior like that: - return a dict of template vars to fill out the template - return something other than a dict and the view decorator will not process the templat...
python
def view(tpl_name, **defaults): ''' Decorator: renders a template for a handler. The handler can control its behavior like that: - return a dict of template vars to fill out the template - return something other than a dict and the view decorator will not process the templat...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L3602-L3624
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Router.add
def add(self, rule, method, target, name=None): ''' Add a new rule or replace the target for an existing rule. ''' anons = 0 # Number of anonymous wildcards found keys = [] # Names of keys pattern = '' # Regular expression pattern with named groups filters = [...
python
def add(self, rule, method, target, name=None): ''' Add a new rule or replace the target for an existing rule. ''' anons = 0 # Number of anonymous wildcards found keys = [] # Names of keys pattern = '' # Regular expression pattern with named groups filters = [...
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train
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ManiacalLabs/PixelWeb
pixelweb/bottle.py
Router.build
def build(self, _name, *anons, **query): ''' Build an URL by filling the wildcards in a rule. ''' builder = self.builder.get(_name) if not builder: raise RouteBuildError("No route with that name.", _name) try: for i, value in enumerate(anons): query['anon%d'%i] = value ...
python
def build(self, _name, *anons, **query): ''' Build an URL by filling the wildcards in a rule. ''' builder = self.builder.get(_name) if not builder: raise RouteBuildError("No route with that name.", _name) try: for i, value in enumerate(anons): query['anon%d'%i] = value ...
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Build an URL by filling the wildcards in a rule.
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L400-L409
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Router.match
def match(self, environ): ''' Return a (target, url_agrs) tuple or raise HTTPError(400/404/405). ''' verb = environ['REQUEST_METHOD'].upper() path = environ['PATH_INFO'] or '/' target = None if verb == 'HEAD': methods = ['PROXY', verb, 'GET', 'ANY'] else: ...
python
def match(self, environ): ''' Return a (target, url_agrs) tuple or raise HTTPError(400/404/405). ''' verb = environ['REQUEST_METHOD'].upper() path = environ['PATH_INFO'] or '/' target = None if verb == 'HEAD': methods = ['PROXY', verb, 'GET', 'ANY'] else: ...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L411-L448
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Route.get_undecorated_callback
def get_undecorated_callback(self): ''' Return the callback. If the callback is a decorated function, try to recover the original function. ''' func = self.callback func = getattr(func, '__func__' if py3k else 'im_func', func) closure_attr = '__closure__' if py3k else 'func_c...
python
def get_undecorated_callback(self): ''' Return the callback. If the callback is a decorated function, try to recover the original function. ''' func = self.callback func = getattr(func, '__func__' if py3k else 'im_func', func) closure_attr = '__closure__' if py3k else 'func_c...
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Return the callback. If the callback is a decorated function, try to recover the original function.
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L537-L545
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Route.get_config
def get_config(self, key, default=None): ''' Lookup a config field and return its value, first checking the route.config, then route.app.config.''' for conf in (self.config, self.app.conifg): if key in conf: return conf[key] return default
python
def get_config(self, key, default=None): ''' Lookup a config field and return its value, first checking the route.config, then route.app.config.''' for conf in (self.config, self.app.conifg): if key in conf: return conf[key] return default
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L553-L558
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Bottle.add_hook
def add_hook(self, name, func): ''' Attach a callback to a hook. Three hooks are currently implemented: before_request Executed once before each request. The request context is available, but no routing has happened yet. after_request Exec...
python
def add_hook(self, name, func): ''' Attach a callback to a hook. Three hooks are currently implemented: before_request Executed once before each request. The request context is available, but no routing has happened yet. after_request Exec...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L616-L630
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Bottle.remove_hook
def remove_hook(self, name, func): ''' Remove a callback from a hook. ''' if name in self._hooks and func in self._hooks[name]: self._hooks[name].remove(func) return True
python
def remove_hook(self, name, func): ''' Remove a callback from a hook. ''' if name in self._hooks and func in self._hooks[name]: self._hooks[name].remove(func) return True
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L632-L636
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Bottle.trigger_hook
def trigger_hook(self, __name, *args, **kwargs): ''' Trigger a hook and return a list of results. ''' return [hook(*args, **kwargs) for hook in self._hooks[__name][:]]
python
def trigger_hook(self, __name, *args, **kwargs): ''' Trigger a hook and return a list of results. ''' return [hook(*args, **kwargs) for hook in self._hooks[__name][:]]
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L638-L640
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Bottle.hook
def hook(self, name): """ Return a decorator that attaches a callback to a hook. See :meth:`add_hook` for details.""" def decorator(func): self.add_hook(name, func) return func return decorator
python
def hook(self, name): """ Return a decorator that attaches a callback to a hook. See :meth:`add_hook` for details.""" def decorator(func): self.add_hook(name, func) return func return decorator
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L642-L648
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Bottle.mount
def mount(self, prefix, app, **options): ''' Mount an application (:class:`Bottle` or plain WSGI) to a specific URL prefix. Example:: root_app.mount('/admin/', admin_app) :param prefix: path prefix or `mount-point`. If it ends in a slash, that slash is m...
python
def mount(self, prefix, app, **options): ''' Mount an application (:class:`Bottle` or plain WSGI) to a specific URL prefix. Example:: root_app.mount('/admin/', admin_app) :param prefix: path prefix or `mount-point`. If it ends in a slash, that slash is m...
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https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L650-L696
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Bottle.merge
def merge(self, routes): ''' Merge the routes of another :class:`Bottle` application or a list of :class:`Route` objects into this application. The routes keep their 'owner', meaning that the :data:`Route.app` attribute is not changed. ''' if isinstance(routes, Bottle...
python
def merge(self, routes): ''' Merge the routes of another :class:`Bottle` application or a list of :class:`Route` objects into this application. The routes keep their 'owner', meaning that the :data:`Route.app` attribute is not changed. ''' if isinstance(routes, Bottle...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L698-L706
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Bottle.reset
def reset(self, route=None): ''' Reset all routes (force plugins to be re-applied) and clear all caches. If an ID or route object is given, only that specific route is affected. ''' if route is None: routes = self.routes elif isinstance(route, Route): routes = [route] ...
python
def reset(self, route=None): ''' Reset all routes (force plugins to be re-applied) and clear all caches. If an ID or route object is given, only that specific route is affected. ''' if route is None: routes = self.routes elif isinstance(route, Route): routes = [route] ...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L735-L745
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Bottle.add_route
def add_route(self, route): ''' Add a route object, but do not change the :data:`Route.app` attribute.''' self.routes.append(route) self.router.add(route.rule, route.method, route, name=route.name) if DEBUG: route.prepare()
python
def add_route(self, route): ''' Add a route object, but do not change the :data:`Route.app` attribute.''' self.routes.append(route) self.router.add(route.rule, route.method, route, name=route.name) if DEBUG: route.prepare()
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L769-L774
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Bottle._cast
def _cast(self, out, peek=None): """ Try to convert the parameter into something WSGI compatible and set correct HTTP headers when possible. Support: False, str, unicode, dict, HTTPResponse, HTTPError, file-like, iterable of strings and iterable of unicodes """ # Empty o...
python
def _cast(self, out, peek=None): """ Try to convert the parameter into something WSGI compatible and set correct HTTP headers when possible. Support: False, str, unicode, dict, HTTPResponse, HTTPError, file-like, iterable of strings and iterable of unicodes """ # Empty o...
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https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L879-L949
ManiacalLabs/PixelWeb
pixelweb/bottle.py
Bottle.wsgi
def wsgi(self, environ, start_response): """ The bottle WSGI-interface. """ try: out = self._cast(self._handle(environ)) # rfc2616 section 4.3 if response._status_code in (100, 101, 204, 304)\ or environ['REQUEST_METHOD'] == 'HEAD': if hasa...
python
def wsgi(self, environ, start_response): """ The bottle WSGI-interface. """ try: out = self._cast(self._handle(environ)) # rfc2616 section 4.3 if response._status_code in (100, 101, 204, 304)\ or environ['REQUEST_METHOD'] == 'HEAD': if hasa...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L951-L975
ManiacalLabs/PixelWeb
pixelweb/bottle.py
BaseRequest.forms
def forms(self): """ Form values parsed from an `url-encoded` or `multipart/form-data` encoded POST or PUT request body. The result is returned as a :class:`FormsDict`. All keys and values are strings. File uploads are stored separately in :attr:`files`. """ forms = F...
python
def forms(self): """ Form values parsed from an `url-encoded` or `multipart/form-data` encoded POST or PUT request body. The result is returned as a :class:`FormsDict`. All keys and values are strings. File uploads are stored separately in :attr:`files`. """ forms = F...
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https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1078-L1087
ManiacalLabs/PixelWeb
pixelweb/bottle.py
BaseRequest.params
def params(self): """ A :class:`FormsDict` with the combined values of :attr:`query` and :attr:`forms`. File uploads are stored in :attr:`files`. """ params = FormsDict() for key, value in self.query.allitems(): params[key] = value for key, value in self.forms.all...
python
def params(self): """ A :class:`FormsDict` with the combined values of :attr:`query` and :attr:`forms`. File uploads are stored in :attr:`files`. """ params = FormsDict() for key, value in self.query.allitems(): params[key] = value for key, value in self.forms.all...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1090-L1098
ManiacalLabs/PixelWeb
pixelweb/bottle.py
BaseRequest.files
def files(self): """ File uploads parsed from `multipart/form-data` encoded POST or PUT request body. The values are instances of :class:`FileUpload`. """ files = FormsDict() for name, item in self.POST.allitems(): if isinstance(item, FileUpload): ...
python
def files(self): """ File uploads parsed from `multipart/form-data` encoded POST or PUT request body. The values are instances of :class:`FileUpload`. """ files = FormsDict() for name, item in self.POST.allitems(): if isinstance(item, FileUpload): ...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1101-L1110
ManiacalLabs/PixelWeb
pixelweb/bottle.py
BaseRequest.json
def json(self): ''' If the ``Content-Type`` header is ``application/json``, this property holds the parsed content of the request body. Only requests smaller than :attr:`MEMFILE_MAX` are processed to avoid memory exhaustion. ''' ctype = self.environ.get('CONTENT_TYPE'...
python
def json(self): ''' If the ``Content-Type`` header is ``application/json``, this property holds the parsed content of the request body. Only requests smaller than :attr:`MEMFILE_MAX` are processed to avoid memory exhaustion. ''' ctype = self.environ.get('CONTENT_TYPE'...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1113-L1124
ManiacalLabs/PixelWeb
pixelweb/bottle.py
BaseRequest.POST
def POST(self): """ The values of :attr:`forms` and :attr:`files` combined into a single :class:`FormsDict`. Values are either strings (form values) or instances of :class:`cgi.FieldStorage` (file uploads). """ post = FormsDict() # We default to application/x-www-...
python
def POST(self): """ The values of :attr:`forms` and :attr:`files` combined into a single :class:`FormsDict`. Values are either strings (form values) or instances of :class:`cgi.FieldStorage` (file uploads). """ post = FormsDict() # We default to application/x-www-...
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https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1209-L1241
ManiacalLabs/PixelWeb
pixelweb/bottle.py
BaseRequest.urlparts
def urlparts(self): ''' The :attr:`url` string as an :class:`urlparse.SplitResult` tuple. The tuple contains (scheme, host, path, query_string and fragment), but the fragment is always empty because it is not visible to the server. ''' env = self.environ http ...
python
def urlparts(self): ''' The :attr:`url` string as an :class:`urlparse.SplitResult` tuple. The tuple contains (scheme, host, path, query_string and fragment), but the fragment is always empty because it is not visible to the server. ''' env = self.environ http ...
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https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1252-L1267
ManiacalLabs/PixelWeb
pixelweb/bottle.py
BaseResponse.copy
def copy(self, cls=None): ''' Returns a copy of self. ''' cls = cls or BaseResponse assert issubclass(cls, BaseResponse) copy = cls() copy.status = self.status copy._headers = dict((k, v[:]) for (k, v) in self._headers.items()) if self._cookies: copy._...
python
def copy(self, cls=None): ''' Returns a copy of self. ''' cls = cls or BaseResponse assert issubclass(cls, BaseResponse) copy = cls() copy.status = self.status copy._headers = dict((k, v[:]) for (k, v) in self._headers.items()) if self._cookies: copy._...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1466-L1476
ManiacalLabs/PixelWeb
pixelweb/bottle.py
BaseResponse.set_header
def set_header(self, name, value): ''' Create a new response header, replacing any previously defined headers with the same name. ''' self._headers[_hkey(name)] = [str(value)]
python
def set_header(self, name, value): ''' Create a new response header, replacing any previously defined headers with the same name. ''' self._headers[_hkey(name)] = [str(value)]
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1536-L1539
ManiacalLabs/PixelWeb
pixelweb/bottle.py
BaseResponse.headerlist
def headerlist(self): ''' WSGI conform list of (header, value) tuples. ''' out = [] headers = list(self._headers.items()) if 'Content-Type' not in self._headers: headers.append(('Content-Type', [self.default_content_type])) if self._status_code in self.bad_headers: ...
python
def headerlist(self): ''' WSGI conform list of (header, value) tuples. ''' out = [] headers = list(self._headers.items()) if 'Content-Type' not in self._headers: headers.append(('Content-Type', [self.default_content_type])) if self._status_code in self.bad_headers: ...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1551-L1564
ManiacalLabs/PixelWeb
pixelweb/bottle.py
BaseResponse.charset
def charset(self, default='UTF-8'): """ Return the charset specified in the content-type header (default: utf8). """ if 'charset=' in self.content_type: return self.content_type.split('charset=')[-1].split(';')[0].strip() return default
python
def charset(self, default='UTF-8'): """ Return the charset specified in the content-type header (default: utf8). """ if 'charset=' in self.content_type: return self.content_type.split('charset=')[-1].split(';')[0].strip() return default
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1573-L1577
ManiacalLabs/PixelWeb
pixelweb/bottle.py
BaseResponse.set_cookie
def set_cookie(self, name, value, secret=None, **options): ''' Create a new cookie or replace an old one. If the `secret` parameter is set, create a `Signed Cookie` (described below). :param name: the name of the cookie. :param value: the value of the cookie. :pa...
python
def set_cookie(self, name, value, secret=None, **options): ''' Create a new cookie or replace an old one. If the `secret` parameter is set, create a `Signed Cookie` (described below). :param name: the name of the cookie. :param value: the value of the cookie. :pa...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1579-L1633
ManiacalLabs/PixelWeb
pixelweb/bottle.py
FormsDict.decode
def decode(self, encoding=None): ''' Returns a copy with all keys and values de- or recoded to match :attr:`input_encoding`. Some libraries (e.g. WTForms) want a unicode dictionary. ''' copy = FormsDict() enc = copy.input_encoding = encoding or self.input_encoding ...
python
def decode(self, encoding=None): ''' Returns a copy with all keys and values de- or recoded to match :attr:`input_encoding`. Some libraries (e.g. WTForms) want a unicode dictionary. ''' copy = FormsDict() enc = copy.input_encoding = encoding or self.input_encoding ...
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https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1900-L1909
ManiacalLabs/PixelWeb
pixelweb/bottle.py
FormsDict.getunicode
def getunicode(self, name, default=None, encoding=None): ''' Return the value as a unicode string, or the default. ''' try: return self._fix(self[name], encoding) except (UnicodeError, KeyError): return default
python
def getunicode(self, name, default=None, encoding=None): ''' Return the value as a unicode string, or the default. ''' try: return self._fix(self[name], encoding) except (UnicodeError, KeyError): return default
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L1911-L1916
ManiacalLabs/PixelWeb
pixelweb/bottle.py
ConfigDict.load_config
def load_config(self, filename): ''' Load values from an *.ini style config file. If the config file contains sections, their names are used as namespaces for the values within. The two special sections ``DEFAULT`` and ``bottle`` refer to the root namespace (no prefix). ...
python
def load_config(self, filename): ''' Load values from an *.ini style config file. If the config file contains sections, their names are used as namespaces for the values within. The two special sections ``DEFAULT`` and ``bottle`` refer to the root namespace (no prefix). ...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L2081-L2095
ManiacalLabs/PixelWeb
pixelweb/bottle.py
ConfigDict.load_dict
def load_dict(self, source, namespace='', make_namespaces=False): ''' Import values from a dictionary structure. Nesting can be used to represent namespaces. >>> ConfigDict().load_dict({'name': {'space': {'key': 'value'}}}) {'name.space.key': 'value'} ''' sta...
python
def load_dict(self, source, namespace='', make_namespaces=False): ''' Import values from a dictionary structure. Nesting can be used to represent namespaces. >>> ConfigDict().load_dict({'name': {'space': {'key': 'value'}}}) {'name.space.key': 'value'} ''' sta...
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train
https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L2097-L2119
ManiacalLabs/PixelWeb
pixelweb/bottle.py
ConfigDict.meta_get
def meta_get(self, key, metafield, default=None): ''' Return the value of a meta field for a key. ''' return self._meta.get(key, {}).get(metafield, default)
python
def meta_get(self, key, metafield, default=None): ''' Return the value of a meta field for a key. ''' return self._meta.get(key, {}).get(metafield, default)
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https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L2154-L2156
ManiacalLabs/PixelWeb
pixelweb/bottle.py
ConfigDict.meta_set
def meta_set(self, key, metafield, value): ''' Set the meta field for a key to a new value. This triggers the on-change handler for existing keys. ''' self._meta.setdefault(key, {})[metafield] = value if key in self: self[key] = self[key]
python
def meta_set(self, key, metafield, value): ''' Set the meta field for a key to a new value. This triggers the on-change handler for existing keys. ''' self._meta.setdefault(key, {})[metafield] = value if key in self: self[key] = self[key]
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https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L2158-L2163
ManiacalLabs/PixelWeb
pixelweb/bottle.py
ResourceManager.lookup
def lookup(self, name): ''' Search for a resource and return an absolute file path, or `None`. The :attr:`path` list is searched in order. The first match is returend. Symlinks are followed. The result is cached to speed up future lookups. ''' if name not in self.cac...
python
def lookup(self, name): ''' Search for a resource and return an absolute file path, or `None`. The :attr:`path` list is searched in order. The first match is returend. Symlinks are followed. The result is cached to speed up future lookups. ''' if name not in self.cac...
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https://github.com/ManiacalLabs/PixelWeb/blob/9eacbfd40a1d35011c2dcea15c303da9636c6b9e/pixelweb/bottle.py#L2312-L2327
ManiacalLabs/PixelWeb
pixelweb/bottle.py
ResourceManager.open
def open(self, name, mode='r', *args, **kwargs): ''' Find a resource and return a file object, or raise IOError. ''' fname = self.lookup(name) if not fname: raise IOError("Resource %r not found." % name) return self.opener(fname, mode=mode, *args, **kwargs)
python
def open(self, name, mode='r', *args, **kwargs): ''' Find a resource and return a file object, or raise IOError. ''' fname = self.lookup(name) if not fname: raise IOError("Resource %r not found." % name) return self.opener(fname, mode=mode, *args, **kwargs)
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ManiacalLabs/PixelWeb
pixelweb/bottle.py
FileUpload.save
def save(self, destination, overwrite=False, chunk_size=2**16): ''' Save file to disk or copy its content to an open file(-like) object. If *destination* is a directory, :attr:`filename` is added to the path. Existing files are not overwritten by default (IOError). :param de...
python
def save(self, destination, overwrite=False, chunk_size=2**16): ''' Save file to disk or copy its content to an open file(-like) object. If *destination* is a directory, :attr:`filename` is added to the path. Existing files are not overwritten by default (IOError). :param de...
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ManiacalLabs/PixelWeb
pixelweb/bottle.py
SimpleTemplate.render
def render(self, *args, **kwargs): """ Render the template using keyword arguments as local variables. """ env = {}; stdout = [] for dictarg in args: env.update(dictarg) env.update(kwargs) self.execute(stdout, env) return ''.join(stdout)
python
def render(self, *args, **kwargs): """ Render the template using keyword arguments as local variables. """ env = {}; stdout = [] for dictarg in args: env.update(dictarg) env.update(kwargs) self.execute(stdout, env) return ''.join(stdout)
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metglobal/django-exchange
exchange/conversion.py
convert_values
def convert_values(args_list): """convert_value in bulk. :param args_list: list of value, source, target currency pairs :return: map of converted values """ rate_map = get_rates(map(itemgetter(1, 2), args_list)) value_map = {} for value, source, target in args_list: args = (value, ...
python
def convert_values(args_list): """convert_value in bulk. :param args_list: list of value, source, target currency pairs :return: map of converted values """ rate_map = get_rates(map(itemgetter(1, 2), args_list)) value_map = {} for value, source, target in args_list: args = (value, ...
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https://github.com/metglobal/django-exchange/blob/2133593885e02f42a4ed2ed4be2763c4777a1245/exchange/conversion.py#L36-L52
metglobal/django-exchange
exchange/conversion.py
convert_value
def convert_value(value, source_currency, target_currency): """Converts the price of a currency to another one using exchange rates :param price: the price value :param type: decimal :param source_currency: source ISO-4217 currency code :param type: str :param target_currency: target ISO-4217...
python
def convert_value(value, source_currency, target_currency): """Converts the price of a currency to another one using exchange rates :param price: the price value :param type: decimal :param source_currency: source ISO-4217 currency code :param type: str :param target_currency: target ISO-4217...
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metglobal/django-exchange
exchange/conversion.py
convert
def convert(price, currency): """Shorthand function converts a price object instance of a source currency to target currency :param price: the price value :param type: decimal :param currency: target ISO-4217 currency code :param type: str :returns: converted price instance :rtype: ``...
python
def convert(price, currency): """Shorthand function converts a price object instance of a source currency to target currency :param price: the price value :param type: decimal :param currency: target ISO-4217 currency code :param type: str :returns: converted price instance :rtype: ``...
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https://github.com/metglobal/django-exchange/blob/2133593885e02f42a4ed2ed4be2763c4777a1245/exchange/conversion.py#L126-L143
metglobal/django-exchange
exchange/utils.py
import_class
def import_class(class_path): """imports and returns given class string. :param class_path: Class path as string :type class_path: str :returns: Class that has given path :rtype: class :Example: >>> import_class('collections.OrderedDict').__name__ 'OrderedDict' """ try: ...
python
def import_class(class_path): """imports and returns given class string. :param class_path: Class path as string :type class_path: str :returns: Class that has given path :rtype: class :Example: >>> import_class('collections.OrderedDict').__name__ 'OrderedDict' """ try: ...
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imports and returns given class string. :param class_path: Class path as string :type class_path: str :returns: Class that has given path :rtype: class :Example: >>> import_class('collections.OrderedDict').__name__ 'OrderedDict'
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https://github.com/metglobal/django-exchange/blob/2133593885e02f42a4ed2ed4be2763c4777a1245/exchange/utils.py#L5-L25
metglobal/django-exchange
exchange/utils.py
insert_many
def insert_many(objects, using="default"): """Insert list of Django objects in one SQL query. Objects must be of the same Django model. Note that save is not called and signals on the model are not raised. Mostly from: http://people.iola.dk/olau/python/bulkops.py """ if not objects: ret...
python
def insert_many(objects, using="default"): """Insert list of Django objects in one SQL query. Objects must be of the same Django model. Note that save is not called and signals on the model are not raised. Mostly from: http://people.iola.dk/olau/python/bulkops.py """ if not objects: ret...
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Insert list of Django objects in one SQL query. Objects must be of the same Django model. Note that save is not called and signals on the model are not raised. Mostly from: http://people.iola.dk/olau/python/bulkops.py
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https://github.com/metglobal/django-exchange/blob/2133593885e02f42a4ed2ed4be2763c4777a1245/exchange/utils.py#L28-L57
metglobal/django-exchange
exchange/utils.py
update_many
def update_many(objects, fields=[], using="default"): """Update list of Django objects in one SQL query, optionally only overwrite the given fields (as names, e.g. fields=["foo"]). Objects must be of the same Django model. Note that save is not called and signals on the model are not raised. Mostly...
python
def update_many(objects, fields=[], using="default"): """Update list of Django objects in one SQL query, optionally only overwrite the given fields (as names, e.g. fields=["foo"]). Objects must be of the same Django model. Note that save is not called and signals on the model are not raised. Mostly...
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https://github.com/metglobal/django-exchange/blob/2133593885e02f42a4ed2ed4be2763c4777a1245/exchange/utils.py#L60-L98
metglobal/django-exchange
exchange/utils.py
memoize
def memoize(ttl=None): """ Cache the result of the function call with given args for until ttl (datetime.timedelta) expires. """ def decorator(obj): cache = obj.cache = {} @functools.wraps(obj) def memoizer(*args, **kwargs): now = datetime.now() key =...
python
def memoize(ttl=None): """ Cache the result of the function call with given args for until ttl (datetime.timedelta) expires. """ def decorator(obj): cache = obj.cache = {} @functools.wraps(obj) def memoizer(*args, **kwargs): now = datetime.now() key =...
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Cache the result of the function call with given args for until ttl (datetime.timedelta) expires.
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https://github.com/metglobal/django-exchange/blob/2133593885e02f42a4ed2ed4be2763c4777a1245/exchange/utils.py#L101-L119
liip/taxi
taxi/timesheet/timesheet.py
round_to_quarter
def round_to_quarter(start_time, end_time): """ Return the duration between `start_time` and `end_time` :class:`datetime.time` objects, rounded to 15 minutes. """ # We don't care about the date (only about the time) but Python # can substract only datetime objects, not time ones today = datetime...
python
def round_to_quarter(start_time, end_time): """ Return the duration between `start_time` and `end_time` :class:`datetime.time` objects, rounded to 15 minutes. """ # We don't care about the date (only about the time) but Python # can substract only datetime objects, not time ones today = datetime...
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Return the duration between `start_time` and `end_time` :class:`datetime.time` objects, rounded to 15 minutes.
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liip/taxi
taxi/timesheet/timesheet.py
TimesheetCollection._timesheets_callback
def _timesheets_callback(self, callback): """ Call a method on all the timesheets, aggregate the return values in a list and return it. """ def call(*args, **kwargs): return_values = [] for timesheet in self: attr = getattr(timesheet, call...
python
def _timesheets_callback(self, callback): """ Call a method on all the timesheets, aggregate the return values in a list and return it. """ def call(*args, **kwargs): return_values = [] for timesheet in self: attr = getattr(timesheet, call...
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https://github.com/liip/taxi/blob/269423c1f1ab571bd01a522819afe3e325bfbff6/taxi/timesheet/timesheet.py#L202-L222
liip/taxi
taxi/timesheet/timesheet.py
TimesheetCollection.load
def load(cls, file_pattern, nb_previous_files=1, parser=None): """ Load a collection of timesheet from the given `file_pattern`. `file_pattern` is a path to a timesheet file that will be expanded with :func:`datetime.date.strftime` and the current date. `nb_previous_files` is the number of ...
python
def load(cls, file_pattern, nb_previous_files=1, parser=None): """ Load a collection of timesheet from the given `file_pattern`. `file_pattern` is a path to a timesheet file that will be expanded with :func:`datetime.date.strftime` and the current date. `nb_previous_files` is the number of ...
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Load a collection of timesheet from the given `file_pattern`. `file_pattern` is a path to a timesheet file that will be expanded with :func:`datetime.date.strftime` and the current date. `nb_previous_files` is the number of other timesheets to load, depending on `file_pattern` this will result in either...
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https://github.com/liip/taxi/blob/269423c1f1ab571bd01a522819afe3e325bfbff6/taxi/timesheet/timesheet.py#L225-L264
liip/taxi
taxi/timesheet/timesheet.py
TimesheetCollection.get_files
def get_files(cls, file_pattern, nb_previous_files, from_date=None): """ Return an :class:`~taxi.utils.structures.OrderedSet` of file paths expanded from `filename`, with a maximum of `nb_previous_files`. See :func:`taxi.utils.file.expand_date` for more information about filename expansion. If ...
python
def get_files(cls, file_pattern, nb_previous_files, from_date=None): """ Return an :class:`~taxi.utils.structures.OrderedSet` of file paths expanded from `filename`, with a maximum of `nb_previous_files`. See :func:`taxi.utils.file.expand_date` for more information about filename expansion. If ...
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Return an :class:`~taxi.utils.structures.OrderedSet` of file paths expanded from `filename`, with a maximum of `nb_previous_files`. See :func:`taxi.utils.file.expand_date` for more information about filename expansion. If `from_date` is set, it will be used as a starting date instead of the current date...
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