gt stringclasses 1
value | context stringlengths 2.49k 119k |
|---|---|
# Copyright 2018 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | |
#!/usr/bin/env python3
"""
Convert $1 -- a markdown file to an HTML file in `/tmp/vim/<parent>/<basename>.html`.
"""
# Standard Library
from os.path import realpath, basename, isfile, isdir, dirname, abspath
import os
import shutil
import subprocess
import sys
import re
import logging
from logging import Logger
from t... | |
# coding=utf-8
from __future__ import absolute_import, unicode_literals, division
import pathtools.patterns
import termcolor
import logging
import shutil
import time
import re
import os
class TimedSet(set):
__slots__ = ["updated"]
def __init__(self, updated):
self.updated = updated
super(Tim... | |
# Copyright (c) 2014 Red Hat, Inc.
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless require... | |
"""Basal Area Simulation"""
#pylint: disable=no-member
# these functions can be improved because the increment is not
# autoregressive, so we can calculate it as a vector operation using
# the other arrays then the actual values are just the cumulative sums
# TODO: change initial age to data age
# TODO: change present... | |
'''
Scratchpad for test-based development.
LICENSING
-------------------------------------------------
hypergolix: A python Golix client.
Copyright (C) 2016 Muterra, Inc.
Contributors
------------
Nick Badger
[email protected] | [email protected] | nickbadger.com
This library is free... | |
# Copyright lowRISC contributors.
# Licensed under the Apache License, Version 2.0, see LICENSE for details.
# SPDX-License-Identifier: Apache-2.0
#
# Convert I2C host format to SVG
import logging as log
from collections import namedtuple
import i2csvg.i2csvg_data as sdata
# validating version of int(x, 0)
# return... | |
from __future__ import absolute_import, unicode_literals
import warnings
from functools import wraps
from itertools import count
from django.db import connection
try:
from django.db import connections, router
except ImportError: # pre-Django 1.2
connections = router = None # noqa
from django.db import mod... | |
# -*- coding: utf-8 -*-
from classytags.arguments import Argument, MultiValueArgument
from classytags.core import Options, Tag
from classytags.helpers import InclusionTag
from classytags.parser import Parser
from cms.models import Page
from cms.plugin_rendering import render_plugins, render_placeholder
from cms.plugins... | |
# -*- coding: utf-8 -*-
# Copyright 2021 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agr... | |
#SBaaS
from .stage03_quantification_measuredData_io import stage03_quantification_measuredData_io
from .stage03_quantification_simulation_query import stage03_quantification_simulation_query
from SBaaS_quantification.stage01_quantification_averages_query import stage01_quantification_averages_query
from SBaaS_physiolog... | |
######################## BEGIN LICENSE BLOCK ########################
# The Original Code is Mozilla Communicator client code.
#
# The Initial Developer of the Original Code is
# Netscape Communications Corporation.
# Portions created by the Initial Developer are Copyright (C) 1998
# the Initial Developer. All Rights R... | |
from hubcheck.pageobjects.basepagewidget import BasePageWidget
from hubcheck.pageobjects.basepageelement import Link
from hubcheck.pageobjects.basepageelement import TextReadOnly
class GroupsMenu1(BasePageWidget):
def __init__(self, owner, locatordict={}):
super(GroupsMenu1,self).__init__(owner,locatordict... | |
# -*- coding: utf-8 -*-
# Copyright (C) 2017 Borewit
# Copyright (C) 2019-2020 Philipp Wolfer
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your o... | |
# Copyright 2021 Google LLC. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law o... | |
from collections import OrderedDict
import datetime
import operator
from django.contrib.admin.utils import (lookup_field, lookup_needs_distinct,
label_for_field)
from django.contrib.admin.views.main import EMPTY_CHANGELIST_VALUE
from django.core.exceptions import ImproperlyConfi... | |
"""
Python variables relevant to the Cas9 mutants described by Klienstiver et al. (2015), Nature, doi:10.1038/nature14592
Contains the variables:
PI_domain: string, WT PI domain (AA 1099-1368) from UniProt (http://www.uniprot.org/uniprot/Q99ZW2) + AAs 1097, 1098
PI_sec_structure: dict with format 'type_#' : (st... | |
"""
The ActivityPlugin is the most powerful plugin for tracking changes of
individual entities. If you use ActivityPlugin you probably don't need to use
TransactionChanges nor TransactionMeta plugins.
You can initalize the ActivityPlugin by adding it to versioning manager.
::
activity_plugin = ActivityPlugin()
... | |
import os
import re
from dnload.common import file_is_ascii_text
from dnload.common import is_listing
from dnload.common import is_verbose
from dnload.common import listify
from dnload.common import locate
from dnload.common import run_command
from dnload.platform_var import PlatformVar
##############################... | |
import os
import unittest
import utils
import time
import string
import json
CURRENT_DIR = os.path.dirname(os.path.abspath(__file__))
FIXTURES_DIR = os.path.join(CURRENT_DIR, "fixtures", "debian", "kafka-connect")
KAFKA_READY = "bash -c 'cub kafka-ready {brokers} 40 -z $KAFKA_ZOOKEEPER_CONNECT && echo PASS || echo FAI... | |
"""
While a Controlfile is being read in MetaServices allow for substitutions to be
made. All of the code is here instead of living in controlfile.py so you don't
have to scroll past the Controlfile class
"""
from enum import Enum
from random import randint
import logging
module_logger = logging.getLogger('control.su... | |
#!/usr/bin/env python
#ripp'ed and adapted from: https://github.com/spesmilo/electrum/blob/master/lib/mnemonic.py
import os
import math
import unicodedata
import binascii #conversion between hex, int, and binary. Also for the crc32 thing
import random as cryptorandom
import zlib
import Keccak, ed25519#in this library
... | |
import json
import atexit
import hashlib
import os
import re
import shutil
import subprocess
import shlex
import tempfile
import types
from contextlib import contextmanager
from insights.config import CommandSpec
from insights.config.static import get_config
from insights.parsers.uname import rhel_release_map
from ins... | |
"""Bridges between the `asyncio` module and Tornado IOLoop.
.. versionadded:: 3.2
This module integrates Tornado with the ``asyncio`` module introduced
in Python 3.4 (and available `as a separate download
<https://pypi.python.org/pypi/asyncio>`_ for Python 3.3). This makes
it possible to combine the two libraries on... | |
#!/usr/bin/env python
#########################################################################################
#
# Vertebral Disks Detection
#
#
# ---------------------------------------------------------------------------------------
# Copyright (c) 2013 Polytechnique Montreal <www.neuro.polymtl.ca>
# Authors: Karun ... | |
# Copyright 2012 NetApp
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applic... | |
# -*- coding: utf-8 -*-
from nose.tools import * # flake8: noqa
from website.models import NodeLog
from website.project.model import Auth
from website.util import permissions
from api.base.settings.defaults import API_BASE
from tests.base import ApiTestCase
from tests.factories import (
ProjectFactory,
Auth... | |
# -*- coding: utf-8 -*-
# BSD 3-Clause License
#
# Copyright (c) 2017, ColoredInsaneAsylums
# All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions are met:
#
# * Redistributions of source code must retain the... | |
# coding=utf-8
"""
This code was generated by
\ / _ _ _| _ _
| (_)\/(_)(_|\/| |(/_ v1.0.0
/ /
"""
from twilio.base import deserialize
from twilio.base import values
from twilio.base.instance_resource import InstanceResource
from twilio.base.list_resource import ListResource
from twilio.base.page i... | |
# Copyright 2021 DeepMind Technologies Limited. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by ... | |
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed unde... | |
'''Works with Tesira models using the Tesira Text Protocol (TTP)'''
# TODO:
# - For Maxtrix Mixer blocks, only cross-point muting is done.
TELNET_TCPPORT = 23
param_Disabled = Parameter({'schema': {'type': 'boolean'}})
param_IPAddress = Parameter({'title': 'IP address', 'schema': {'type': 'string'}})
# TODO REMOVE ... | |
"""
Python Interchangeable Virtual Instrument Library
Copyright (c) 2012-2014 Alex Forencich
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
in the Software without restriction, including without limitation the... | |
"""Admin API."""
from django import http
from django.contrib.contenttypes.models import ContentType
from django.utils.translation import ugettext as _
from django_filters import rest_framework as dj_filters
from drf_spectacular.utils import extend_schema, extend_schema_view
from rest_framework import filters, rendere... | |
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distr... | |
# Protocol Buffers - Google's data interchange format
# Copyright 2008 Google Inc. All rights reserved.
# http://code.google.com/p/protobuf/
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions are
# met:
#
# * Redistributions o... | |
# coding=utf-8
# --------------------------------------------------------------------------
# Copyright (c) Microsoft Corporation. All rights reserved.
# Licensed under the MIT License. See License.txt in the project root for license information.
# Code generated by Microsoft (R) AutoRest Code Generator.
# Changes may ... | |
# -*- coding: utf-8 -*-
# See LICENSE file for copyright and license details
''' Test 'datatype' module. '''
import unittest
from misery import (
misc,
ast,
datatype,
)
class TestMarkOutDatatypes(unittest.TestCase):
def test_simple_func_decl(self):
input_ast = ast.Module(
decl... | |
#
# Copyright (c) 2015 nexB Inc. and others. All rights reserved.
# http://nexb.com and https://github.com/nexB/scancode-toolkit/
# The ScanCode software is licensed under the Apache License version 2.0.
# Data generated with ScanCode require an acknowledgment.
# ScanCode is a trademark of nexB Inc.
#
# You may not use... | |
from packaging.version import Version
import pickle
import random
import warnings
import mxnet as mx
import numpy as np
import pytest
from mxnet.gluon import Trainer
from mxnet.gluon.data import Dataset, DataLoader
from mxnet.gluon.nn import HybridSequential, Dense
import mlflow
import mlflow.gluon
from mlflow.tracki... | |
from __future__ import absolute_import
from contextlib import contextmanager
import os
import sys
import re
import textwrap
import site
import scripttest
import virtualenv
from tests.lib.path import Path, curdir, u
DATA_DIR = Path(__file__).folder.folder.join("data").abspath
SRC_DIR = Path(__file__).abspath.folder.... | |
from lpoly import LPoly, Poly
from sympy.polys.monomialtools import (
monomial_mul,
monomial_div,
monomial_lcm,
monomial_lex_key as O_lex,
monomial_grlex_key as O_grlex,
monomial_grevlex_key as O_grevlex,
)
from sympy.utilities import any, all
def S_poly(tp1,tp2):
"""expv1,p1 = tp1 with ex... | |
import copy
import re
import django
from django import forms
from django.core.files.uploadedfile import InMemoryUploadedFile
from django.forms.utils import flatatt
from django.forms.widgets import FileInput
from django.template.loader import render_to_string
from django.utils import formats, six
from django.utils.enco... | |
# Copyright 2021 Google LLC. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law o... | |
"""
Consul KV Endpoint Access
"""
from consulate.api import base
from consulate import utils
class KV(base.Endpoint):
"""The :py:class:`consul.api.KV` class implements a :py:class:`dict` like
interface for working with the Key/Value service. Simply use items on the
:py:class:`consulate.Session` like you ... | |
# Copyright (c) 2006,2007 Mitch Garnaat http://garnaat.org/
#
# Permission is hereby granted, free of charge, to any person obtaining a
# copy of this software and associated documentation files (the
# "Software"), to deal in the Software without restriction, including
# without limitation the rights to use, copy, modi... | |
class GameData:
"""Information about Skyrim."""
NEW_CHAR_LEVEL_INFO = {
"Breton": {
"Illusion": 20,
"Conjuration": 25,
"Destruction": 15,
"Restoration": 20,
"Alteration": 20,
"Enchanting": 15,
"Smithing": 15,
... | |
# -*- coding: utf-8 -*-
"""
httpbin.helpers
~~~~~~~~~~~~~~~
This module provides helper functions for httpbin.
"""
import json
import base64
from hashlib import md5
from werkzeug.http import parse_authorization_header
from flask import request, make_response
from six.moves.urllib.parse import urlparse, urlunparse
... | |
from __future__ import unicode_literals
import base64
import binascii
import hashlib
from django.dispatch import receiver
from django.conf import settings
from django.test.signals import setting_changed
from django.utils import importlib
from django.utils.datastructures import SortedDict
from django.utils.encoding im... | |
# -------------------------------------------------------------------------
# Copyright (c) Microsoft Corporation. All rights reserved.
# Licensed under the MIT License. See License.txt in the project root for
# license information.
# --------------------------------------------------------------------------
# pylint: ... | |
# -*- coding: utf-8 -*-
#*****************************************************************************
# Copyright (C) 2003-2006 Gary Bishop.
# Copyright (C) 2006 Jorgen Stenarson. <[email protected]>
#
# Distributed under the terms of the BSD License. The full license is in
# the file COPYIN... | |
"""Test for RFlink light components.
Test setup of rflink lights component/platform. State tracking and
control of Rflink switch devices.
"""
import asyncio
from homeassistant.components.light import ATTR_BRIGHTNESS
from homeassistant.components.rflink import EVENT_BUTTON_PRESSED
from homeassistant.const import (
... | |
# -*- coding: UTF-8 -*-
# Copyright 2016-2018 Luc Saffre
# License: BSD (see file COPYING for details)
"""
Remove all tags except some when saving the content of a
:class:`RichHtmlField <lino.core.fields.RichHtmlField>`.
When copying rich text from other applications into Lino, the text can
contain styles and other th... | |
# -*- coding: utf-8 -*-
# Copyright 2022 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or... | |
# Copyright 2019 Objectif Libre
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agr... | |
import cgi
import urllib
import time
import random
import urlparse
import hmac
import base64
VERSION = '1.0' # Hi Blaine!
HTTP_METHOD = 'GET'
SIGNATURE_METHOD = 'PLAINTEXT'
# Generic exception class
class OAuthError(RuntimeError):
def __init__(self, message='OAuth error occured.'):
RuntimeError.__init__(s... | |
"""
Functions for Shapelet related operations
"""
import sys
import numpy as np
from scipy.misc import factorial
from scipy import special
#TODO: hermite 2d, round gaussian?
#TODO: Fourier transform
#########################################################
#def polar2cart():
# """Convert a set of polar coefficien... | |
#!/usr/bin/python -u
import sys
import os
import subprocess
import time
import datetime
import shutil
import tempfile
import hashlib
import re
debug = False
################
#### Telegraf Variables
################
# Packaging variables
PACKAGE_NAME = "telegraf"
INSTALL_ROOT_DIR = "/usr/bin"
LOG_DIR = "/var/log/tel... | |
#!/usr/bin/python2.7
# Copyright 2010 Google Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or ... | |
# -*- coding: utf-8 -*-
"""
Created on Sun Feb 12 00:35:12 2017
@author: abu
"""
import numpy as np
np.random.seed(1989)
import os
import glob
import datetime
import pandas as pd
import time
import argparse
#import warnings
#warnings.filterwarnings("ignore")
from sklearn.cross_validation import KFold
from sklearn.m... | |
from django.db.models.query import QuerySet
from django.db.models.lookups import Lookup
from django.db.models.sql.where import SubqueryConstraint, WhereNode
from django.utils.six import text_type
from wagtail.wagtailsearch.index import class_is_indexed
class FilterError(Exception):
pass
class FieldError(Excep... | |
# coding=utf-8
#
# Copyright 2014 Red Hat, Inc.
# Copyright 2013 Hewlett-Packard Development Company, L.P.
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# ... | |
# Copyright (c) 2013 Hewlett-Packard Development Company, L.P.
# Copyright 2013 Canonical Corp.
# All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# htt... | |
#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not us... | |
# coding: utf-8
import inspect
from . import registry
from .exceptions import processing, DocumentStep
from .fields import BaseField, DocumentField, DictField
from .roles import DEFAULT_ROLE, Var, Scope, all_, construct_matcher, Resolvable, Resolution
from .resolutionscope import ResolutionScope, EMPTY_SCOPE
from ._co... | |
#! /usr/bin/env python
#
# example2.py -- Simple, configurable FITS viewer.
#
# Eric Jeschke ([email protected])
#
# Copyright (c) Eric R. Jeschke. All rights reserved.
# This is open-source software licensed under a BSD license.
# Please see the file LICENSE.txt for details.
#
from __future__ import print_function
impor... | |
import sys
import numpy as np
import pdb
class DependencyDecoder():
'''
Dependency decoder class
'''
def __init__(self):
self.verbose = False
def parse_marginals_nonproj(self, scores):
'''
Compute marginals and the log-partition function using the matrix-tree theorem
... | |
# Copyright 2013 OpenStack Foundation
#
# Licensed under the Apache License, Version 2.0 (the "License"); you may
# not use this file except in compliance with the License. You may obtain
# a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law ... | |
"""
Generic utilities for testing txyoga.
"""
from functools import partial
from StringIO import StringIO
from twisted.internet import defer
from twisted.web import http, http_headers, resource, server
from txyoga.serializers import json
BASE_URL = "http://localhost"
correctAcceptHeaders = http_headers.Headers()
co... | |
'''tzinfo timezone information for Asia/Magadan.'''
from pytz.tzinfo import DstTzInfo
from pytz.tzinfo import memorized_datetime as d
from pytz.tzinfo import memorized_ttinfo as i
class Magadan(DstTzInfo):
'''Asia/Magadan timezone definition. See datetime.tzinfo for details'''
zone = 'Asia/Magadan'
_utc_... | |
## Automatically adapted for numpy.oldnumeric May 17, 2011 by -c
# Natural Language Toolkit: Classifiers
#
# Copyright (C) 2001 University of Pennsylvania
# Author: Edward Loper <[email protected]>
# URL: <http://nltk.sf.net>
# For license information, see LICENSE.TXT
#
# $Id: __init__.py,v 1.2 2003/10/27... | |
# tools for accessing tables from the NASA Exoplanet Archive,
# either by downloading them downloading or loading local tables
# to-do:
# [] implement filtering by the "where" keyword to the archive
from ..imports import *
class Downloader(Talker):
expiration = 1.0
# anything special to know about reading ... | |
# -*- coding: utf-8 -*-
# This file is part of beets.
# Copyright 2016, Fabrice Laporte, Yevgeny Bezman, and Adrian Sampson.
#
# Permission is hereby granted, free of charge, to any person obtaining
# a copy of this software and associated documentation files (the
# "Software"), to deal in the Software without restrict... | |
"""The tests for the logbook component."""
# pylint: disable=protected-access,too-many-public-methods
from datetime import timedelta
import unittest
from unittest.mock import patch
from homeassistant.components import sun
import homeassistant.core as ha
from homeassistant.const import (
EVENT_STATE_CHANGED, EVENT_... | |
# Copyright The PyTorch Lightning team.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to i... | |
# -*- coding: utf-8 -*-
from PyQt4 import QtCore, QtGui
from acq4.util.DataManager import *
from acq4.util.debug import *
import os
class DirTreeWidget(QtGui.QTreeWidget):
sigSelectionChanged = QtCore.Signal(object)
### something funny is happening with sigSelectionChanged and currentItemChanged; the signal... | |
"""Addins are the primary way of extending FeedPlatform the add
additional aggregator functionality.
You'll find a number of them in the builtin ``feedplatform.lib``
module, although custom addins can easily be created, and
generally, when extended or specialized customization is required,
creating an addin will be a ... | |
# Copyright 2015 Google Inc. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or a... | |
"""
Some JSON encoding and decoding utilities.
"""
from __future__ import absolute_import, division, print_function
import json
from datetime import date,datetime,time
import base64
import zlib
import logging
logger = logging.getLogger('jsonUtil')
class json_compressor:
"""Used for files and other large things ... | |
import ConfigParser
from email import parser
from email.MIMEMultipart import MIMEMultipart
from email.MIMEText import MIMEText
from email.Utils import formatdate
from getpass import getpass
import logging
import mimetypes
import os
import poplib
import smtplib
import sys
import time
log = logging.getLogger("mail")
... | |
#!/usr/bin/python
# Copyright (c) 2010-2012 OpenStack, LLC.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicabl... | |
import pdb
import struct
import sys
import gzip
from io import BufferedReader
from collections import Counter, defaultdict
import collections.abc
from .gr import Gr, Entry
MAX_LEN = 2**29-1 # As defined by max size supported by bai indexes.
def bisect_left(a, x):
lo = 0
hi = len(a)
while lo < hi:
... | |
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use ... | |
# Copyright 2013 by David Arenillas and Anthony Mathelier. All rights reserved.
# This code is part of the Biopython distribution and governed by its
# license. Please see the LICENSE file that should have been included
# as part of this package.
"""Provides read access to a JASPAR5 formatted database.
This modules re... | |
from __future__ import division, absolute_import, print_function, unicode_literals
import asyncore
import socket
import struct
import threading
import sys
from collections import deque
DEBUG = False
PY3 = False
if sys.version_info[0] == 3:
import queue as Queue
PY3 = True
else:
import Queue
range = xran... | |
# transform() function is where you should start reading to understand this code.
# transform() has to be called at the bottom of this file for things to work.
from sys import *
import re
from importlib import import_module
import importlib.util
# functions:
def transform():
file_name = argv[1] # so you can us... | |
from __future__ import absolute_import
import logging
import six
from django.core.context_processors import csrf
from django.core.urlresolvers import reverse
from django.http import HttpResponse, HttpResponseBadRequest, HttpResponseNotFound, HttpResponseRedirect
from django.middleware.csrf import CsrfViewMiddleware
f... | |
# Copyright (c) 2010 Aldo Cortesi
# Copyright (c) 2011 Florian Mounier
# Copyright (c) 2011 oitel
# Copyright (c) 2011 Kenji_Takahashi
# Copyright (c) 2011 Paul Colomiets
# Copyright (c) 2012, 2014 roger
# Copyright (c) 2012 nullzion
# Copyright (c) 2013 Tao Sauvage
# Copyright (c) 2014-2015 Sean Vig
# Copyright (c) 20... | |
from __future__ import division
import csv
import itertools
import json
import random
import tempfile
from django.conf import settings
from dateutil.relativedelta import relativedelta
from dateutil.parser import parse as parse_date
from frontend import bq_schemas as schemas
from gcutils.bigquery import Client
cla... | |
import io
from random import randint, choice
from unittest import TestCase
import api.scans.controllers as api_scans
from api.common.errors import HTTPInvalidParam
from mock import MagicMock, patch
from api.scans.models import Scan, ScanEvents
from api.scans.schemas import ScanSchema
from api.files_ext.schemas import... | |
__author__ = 'sushil, abdullahS'
import sys
from pprint import pprint, pformat # NOQA
from optparse import OptionParser
import logging
from sets import Set
from hydra.lib import util
from hydra.lib.h_analyser import HAnalyser
from hydra.lib.hydrabase import HydraBase
try:
# Python 2.x
from ConfigParser import... | |
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the... | |
from datetime import date, datetime
from inspect import isclass
import six
import sqlalchemy as sa
__version__ = '0.4.4'
class Column(sa.Column):
def __init__(self, *args, **kwargs):
kwargs.setdefault('info', {})
kwargs['info'].setdefault('choices', kwargs.pop('choices', None))
kwargs['... | |
from itertools import izip
import numpy as np
import geo2d.geometry as g
# import matplotlib.pyplot as plt
import math
import random
import time
from walker import OdoListener
class RobotPose():
point = g.Point(0, 0)
direction = 0.0
distance = 100
weight = 0.0
def __init__(self, x, y, direct):
... | |
# coding: utf-8
"""
Kubernetes
No description provided (generated by Openapi Generator https://github.com/openapitools/openapi-generator) # noqa: E501
The version of the OpenAPI document: release-1.23
Generated by: https://openapi-generator.tech
"""
import pprint
import re # noqa: F401
import si... | |
#!/usr/bin/env python
"""peep ("prudently examine every package") verifies that packages conform to a
trusted, locally stored hash and only then installs them::
peep install -r requirements.txt
This makes your deployments verifiably repeatable without having to maintain a
local PyPI mirror or use a vendor lib. Ju... | |
__author__ = 'jonathan'
import logging
import test.nova._fixtures as models
from lib.rome.core.orm.query import Query
from lib.rome.core.session.session import Session as Session
def test_relationships_single_str(save_instance=True, save_info_cache=True, use_update=False, use_session=False):
print("Ensure that ... | |
import sympy
import tempfile
import os
from sympy import symbols, Eq
from sympy.external import import_module
from sympy.tensor import IndexedBase, Idx
from sympy.utilities.autowrap import autowrap, ufuncify, CodeWrapError
from sympy.utilities.pytest import skip
numpy = import_module('numpy', min_module_version='1.6.1... | |
"""`Nanduri2012Model`, `Nanduri2012Spatial`, `Nanduri2012Temporal`
[Nanduri2012]_"""
import numpy as np
from .base import Model, SpatialModel, TemporalModel
from ._nanduri2012 import spatial_fast, temporal_fast
from ..implants import ElectrodeArray, DiskElectrode
from ..stimuli import Stimulus
class Nanduri2012Spa... | |
# Standard library imports
import string, pkgutil
from xceptions import *
# Third party imports
#### netcdf --- currently support cdms2, python-netCDF4 and Scientific
l = pkgutil.iter_modules()
ll = map( lambda x: x[1], l )
supportedNetcdf = ['cdms2','netCDF4','Scientific','ncq3']
installedSupportedNetcdf = []
#... |
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