repo stringlengths 2 99 | file stringlengths 13 225 | code stringlengths 0 18.3M | file_length int64 0 18.3M | avg_line_length float64 0 1.36M | max_line_length int64 0 4.26M | extension_type stringclasses 1
value |
|---|---|---|---|---|---|---|
parameter-exchange | parameter-exchange-master/src/eval/psi_eval.py | #!/usr/bin/env python3
"""Evaluate PSI properties.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
import contextlib
import logging
import os
import platform
import subprocess
import sys
import time
from lib import config, helpers
from lib... | 15,572 | 43.367521 | 79 | py |
parameter-exchange | parameter-exchange-master/src/eval/shared.py | #!/usr/bin/env python3
"""Shared eval methods.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import os
import select
import subprocess
from collections.abc import Iterable
from typing import TextIO, Any, List
from tqdm import tqdm
from l... | 3,289 | 27.119658 | 71 | py |
parameter-exchange | parameter-exchange-master/src/eval/client.py | #!/usr/bin/env python3
"""Evaluates Client App.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
# Constants -------------------------------------------------------------------
import argparse
import atexit
import contextlib
import json
import logging
impo... | 23,282 | 39.421875 | 147 | py |
parameter-exchange | parameter-exchange-master/src/eval/metric_eval.py | #!/usr/bin/env python3
"""Evaluate the number of candidated produced by the offset metric.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
import logging
import os
import numpy as np
from lib import config
from lib.logging import configur... | 8,233 | 37.657277 | 79 | py |
parameter-exchange | parameter-exchange-master/src/eval/__init__.py | 0 | 0 | 0 | py | |
parameter-exchange | parameter-exchange-master/src/eval/data_provider.py | #!/usr/bin/env python3
"""Evaluates Data Provider App.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
import atexit
import contextlib
import json
import logging
import os
import pickle
import random
import select
import shutil
import subpr... | 21,695 | 40.563218 | 82 | py |
parameter-exchange | parameter-exchange-master/src/eval/ot_eval.py | #!/usr/bin/env python3
"""Evaluate OT properties.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
import contextlib
import logging
import os
import platform
import subprocess
import sys
import time
from lib import config, helpers
from lib.... | 18,180 | 44.339152 | 79 | py |
parameter-exchange | parameter-exchange-master/src/eval/psi/sender.py | #!/usr/bin/env python3
"""PSI Sender script
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
import json
import sys
import time
from memory_profiler import memory_usage
from lib import config
sys.path.append(config.WORKING_DIR + 'cython/p... | 2,402 | 31.04 | 72 | py |
parameter-exchange | parameter-exchange-master/src/eval/psi/receiver.py | #!/usr/bin/env python3
"""PSI receiver script.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
import json
import logging
import sys
import time
from memory_profiler import memory_usage
from lib import config
sys.path.append(config.WORKI... | 2,612 | 30.865854 | 72 | py |
parameter-exchange | parameter-exchange-master/src/eval/psi/__init__.py | 0 | 0 | 0 | py | |
parameter-exchange | parameter-exchange-master/src/eval/ot/sender.py | #!/usr/bin/env python3
"""OT Sender script.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
import json
import random
import sys
import time
from memory_profiler import memory_usage
from lib import config
sys.path.append(config.WORKING_D... | 2,852 | 32.174419 | 75 | py |
parameter-exchange | parameter-exchange-master/src/eval/ot/receiver.py | #!/usr/bin/env python3
"""OT receiver script.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
import json
import random
import sys
import time
from memory_profiler import memory_usage
from lib import config
sys.path.append(config.WORKING... | 2,818 | 32.164706 | 75 | py |
parameter-exchange | parameter-exchange-master/src/eval/ot/__init__.py | 0 | 0 | 0 | py | |
parameter-exchange | parameter-exchange-master/src/key_server/main.py | #!/usr/bin/env python3
"""Blueprint for main pages.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import os
from typing import Any
from flask import (Blueprint, render_template, g, current_app,
send_from_directory)
fro... | 1,420 | 25.314815 | 77 | py |
parameter-exchange | parameter-exchange-master/src/key_server/connector.py | #!/usr/bin/env python3
"""Connector to backend and celery.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import secrets
from typing import Dict
from celery import Task
from flask import g, current_app as app, request, url_for, render_temp... | 9,315 | 30.261745 | 79 | py |
parameter-exchange | parameter-exchange-master/src/key_server/celery.py | #!/usr/bin/env python
"""Startup script for celery worker.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
# noinspection PyUnresolvedReferences
from key_server import celery_app, create_app
app = create_app()
app.app_context().push()
| 300 | 20.5 | 45 | py |
parameter-exchange | parameter-exchange-master/src/key_server/client.py | #!/usr/bin/env python3
"""Client Pages of key server.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
from flask import (Blueprint, jsonify)
from flask_httpauth import HTTPBasicAuth
from key_server.connector import get_hash_key, retrieve_k... | 2,496 | 26.141304 | 74 | py |
parameter-exchange | parameter-exchange-master/src/key_server/__init__.py | #!/usr/bin/env python3
"""Application factory for keyserver app.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import os
from celery import Celery
from flask import Flask
from lib import config, database
from lib.key_server_backend import KeyServer
fro... | 2,721 | 29.58427 | 79 | py |
parameter-exchange | parameter-exchange-master/src/key_server/provider.py | #!/usr/bin/env python3
"""Provider Pages of key server.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
from flask import (Blueprint, jsonify)
from flask_httpauth import HTTPBasicAuth
from key_server.connector import get_hash_key, retrieve... | 2,588 | 27.141304 | 75 | py |
parameter-exchange | parameter-exchange-master/src/key_server/key_database.py | #!/usr/bin/env python3
"""Database Models for key server only.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
from datetime import datetime
from lib.database import db
# noinspection PyUnresolvedReferences
from lib.user_database import Client, Owner
# Ne... | 2,187 | 32.661538 | 68 | py |
parameter-exchange | parameter-exchange-master/src/storage_server/main.py | #!/usr/bin/env python3
"""Blueprint for main pages.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import os
from typing import Any
from flask import (Blueprint, render_template, g, current_app,
send_from_directory)
fro... | 1,413 | 25.185185 | 77 | py |
parameter-exchange | parameter-exchange-master/src/storage_server/connector.py | #!/usr/bin/env python3
"""Connector to backend and celery.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
from typing import Dict, List
from celery import Task
from flask import g, current_app as app, render_template, url_for
from lib imp... | 5,899 | 30.550802 | 79 | py |
parameter-exchange | parameter-exchange-master/src/storage_server/celery.py | #!/usr/bin/env python
"""Startup script for celery worker.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
# noinspection PyUnresolvedReferences
from storage_server import celery_app, create_app
app = create_app()
app.app_context().push()
| 304 | 20.785714 | 49 | py |
parameter-exchange | parameter-exchange-master/src/storage_server/storage_database.py | #!/usr/bin/env python3
"""Database Models for storage server only.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
from datetime import datetime
from lib.database import db
# noinspection PyUnresolvedReferences
from lib.user_database import Client, Owner
... | 4,311 | 34.933333 | 78 | py |
parameter-exchange | parameter-exchange-master/src/storage_server/client.py | #!/usr/bin/env python3
"""Client Pages of storage server.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import secrets
from flask import Blueprint, jsonify, request, current_app as app
from flask_httpauth import HTTPBasicAuth
from lib im... | 7,578 | 29.316 | 78 | py |
parameter-exchange | parameter-exchange-master/src/storage_server/__init__.py | #!/usr/bin/env python3
"""Application factory for storageserver app.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import os
from celery import Celery
from flask import Flask
from lib import config, database
from lib.logging import configure_root_loger... | 2,793 | 31.488372 | 79 | py |
parameter-exchange | parameter-exchange-master/src/storage_server/provider.py | #!/usr/bin/env python3
"""Provider Pages of storage server.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
from flask import Blueprint, request, jsonify, render_template
from flask_httpauth import HTTPBasicAuth
from lib.base_client import... | 5,405 | 30.068966 | 79 | py |
parameter-exchange | parameter-exchange-master/src/test/test_record.py | #!/usr/bin/env python3
"""Test for record class.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
from unittest import TestCase
from unittest.mock import patch
from lib.helpers import from_base64
from lib.record import Record, hash_to_index, round_s, get_p... | 7,512 | 31.244635 | 77 | py |
parameter-exchange | parameter-exchange-master/src/test/test_db_cli.py | #!/usr/bin/env python3
"""Test of User Database CLI.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import io
import logging
import os
import sys
from unittest import TestCase
from unittest.mock import patch
from lib import config
from lib.base_client im... | 7,982 | 41.238095 | 88 | py |
parameter-exchange | parameter-exchange-master/src/test/test_similarity_metrics.py | #!/usr/bin/env python3
"""Test the similarity metrics.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import copy
import unittest
from unittest import TestCase
from unittest.mock import patch
import lib.similarity_metrics as sm
from lib.record import Rec... | 12,025 | 33.657061 | 79 | py |
parameter-exchange | parameter-exchange-master/src/test/test_integrity.py | #! /usr/bin/env python3
"""Integrity Test for client application.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import contextlib
import json
import logging
import os
import shutil
import warnings
from typing import List
from unittest import TestCase
fro... | 10,326 | 34.245734 | 79 | py |
parameter-exchange | parameter-exchange-master/src/test/test_psi.py | #!/usr/bin/env python3
"""Test Cython Port of libPSI.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import multiprocessing
import sys
from unittest import TestCase, skip
from lib import config
# Python Version of libPSI
from lib.helpers import get_free... | 8,299 | 34.021097 | 75 | py |
parameter-exchange | parameter-exchange-master/src/test/test_ot_receiver.py | #!/usr/bin/env python3
"""Test Class for OTReceiver
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import io
import logging
import sys
from unittest import TestCase, mock
from unittest.mock import Mock
import OTReceiver
from lib.helpers import captured_o... | 1,413 | 25.679245 | 68 | py |
parameter-exchange | parameter-exchange-master/src/test/test_psi_receiver.py | #!/usr/bin/env python3
"""Test Class for PSIReceiver.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import io
import logging
import sys
from unittest import TestCase, mock
from unittest.mock import Mock
import PSIReceiver
from lib import config
@mock.... | 2,159 | 32.230769 | 74 | py |
parameter-exchange | parameter-exchange-master/src/test/test_main_scripts.py | #!/usr/bin/env python3
"""Hacky test for coverage of main files.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import os
import tempfile
import random_record_generator
import setuptools
from unittest import TestCase, mock, skip
import logging
from unitt... | 1,327 | 28.511111 | 70 | py |
parameter-exchange | parameter-exchange-master/src/test/test_storage_server.py | #!/usr/bin/env python3
"""Test of storage server backend.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import os
import shutil
from unittest import TestCase, mock
from unittest.mock import Mock, patch
from flask import Flask
from pybloom... | 9,799 | 35.70412 | 79 | py |
parameter-exchange | parameter-exchange-master/src/test/test_storage_app.py | #!/usr/bin/env python3
"""Test storage server frontend flask application.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import os
import shutil
import warnings
from datetime import datetime, timedelta
from unittest import TestCase, skip
fr... | 31,798 | 41.398667 | 81 | py |
parameter-exchange | parameter-exchange-master/src/test/test_data_provider.py | #!/usr/bin/env python3
"""Testing the data provider's CLI.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
import json
import logging
import tempfile
from unittest import TestCase
from unittest.mock import patch
import responses
import da... | 5,974 | 33.738372 | 79 | py |
parameter-exchange | parameter-exchange-master/src/test/test_base_client.py | #!/usr/bin/env python3
"""Test of base client.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
from unittest import TestCase, mock
from unittest.mock import Mock, patch
import requests
import responses
from lib import base_client as bc
fro... | 10,410 | 32.583871 | 78 | py |
parameter-exchange | parameter-exchange-master/src/test/test_client.py | #!/usr/bin/env python3
"""Testing the client CLI.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
import json
import logging
import os
import shutil
import tempfile
from typing import List
from unittest import TestCase
from unittest.mock im... | 17,897 | 38.861915 | 94 | py |
parameter-exchange | parameter-exchange-master/src/test/test_user_database.py | #!/usr/bin/env python3
"""Test user databases, i.e. Client and Data Provider DB.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import os
import shutil
from time import time
from unittest import TestCase
from unittest.mock import patch, Moc... | 6,139 | 33.689266 | 77 | py |
parameter-exchange | parameter-exchange-master/src/test/__init__.py | 0 | 0 | 0 | py | |
parameter-exchange | parameter-exchange-master/src/test/test_base_server.py | #!/usr/bin/env python3
"""Test of the base server code.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import json
import logging
import shutil
from unittest import TestCase
from unittest.mock import patch
from flask import Flask
import lib.base_server ... | 6,562 | 41.070513 | 79 | py |
parameter-exchange | parameter-exchange-master/src/test/test_database.py | #!/usr/bin/env python3
"""Test the key server database.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import contextlib
import logging
import os
from unittest import TestCase
from flask import Flask
from lib import config
from lib import database
test... | 2,125 | 35.033898 | 75 | py |
parameter-exchange | parameter-exchange-master/src/test/test_key_server_backend.py | #!/usr/bin/env python3
"""Test the key server backend.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import os
import pickle
import shutil
from unittest import TestCase, mock
from unittest.mock import Mock, patch
import lib.config as conf... | 4,111 | 35.714286 | 80 | py |
parameter-exchange | parameter-exchange-master/src/test/test_ot.py | #!/usr/bin/env python3
"""Test Cython Port of libOTe.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import multiprocessing
import sys
from unittest import TestCase, skip
from lib import config
from lib.helpers import get_free_port
config.OT_SETSIZE = 2... | 7,501 | 34.386792 | 83 | py |
parameter-exchange | parameter-exchange-master/src/test/test_keyserver_app.py | #!/usr/bin/env python3
"""Test key server frontend flask application.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import json
import logging
import os
import socket
import warnings
from datetime import datetime, timedelta
from unittest import TestCase,... | 25,395 | 42.635739 | 79 | py |
parameter-exchange | parameter-exchange-master/src/test/test_helpers.py | #!/usr/bin/env python3
"""Test class for helper functions.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import os
import shutil
import socket
import ssl
from unittest import TestCase
import multiprocessing as mp
import lib.config as config
import lib.h... | 3,336 | 27.279661 | 71 | py |
parameter-exchange | parameter-exchange-master/src/lib/base_server.py | #!/usr/bin/env python3
"""This file contains base server functionalities shared by both server
components.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import flask.wrappers
import redis
from flask import jsonify, current_app as app
from... | 2,852 | 25.915094 | 75 | py |
parameter-exchange | parameter-exchange-master/src/lib/storage_server_backend.py | #!/usr/bin/env python3
"""This file contains the implementation of the platform's storage server
component
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import os
import sys
from typing import List, Iterable, Tuple
from pybloomfilter impo... | 11,645 | 35.280374 | 79 | py |
parameter-exchange | parameter-exchange-master/src/lib/key_server_backend.py | #!/usr/bin/env python3
"""This file contains the implementation of the platform's key server
component
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import pickle
import secrets
import sys
from os import path
from typing import List
from ... | 4,830 | 35.323308 | 82 | py |
parameter-exchange | parameter-exchange-master/src/lib/similarity_metrics.py | """This module contains various similarity metrics.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import copy
import logging
import math
import re
from abc import ABC, abstractmethod
from collections.abc import Iterator
from typing import List, Iterable,... | 15,058 | 35.11271 | 80 | py |
parameter-exchange | parameter-exchange-master/src/lib/base_client.py | #!/usr/bin/env python3
"""Base Client for both client applications.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import atexit
import logging
import math
import multiprocessing as mp
import sys
import time
from abc import ABC, abstractmethod
from typing... | 13,198 | 34.01061 | 79 | py |
parameter-exchange | parameter-exchange-master/src/lib/record.py | #!/usr/bin/env python3
"""
Class representing one record.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import hashlib
import json
import logging
import struct
from typing import List, Tuple, Any
from Crypto.Cipher import AES
from lib import config
fro... | 9,312 | 34.143396 | 78 | py |
parameter-exchange | parameter-exchange-master/src/lib/logging.py | #!/usr/bin/env python3
"""Custom logger supporting colors.
Adapted from:
https://stackoverflow.com/questions/384076/how-can-i-color-python-logging
-output
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import copy
import logging
import os
import sys
fr... | 3,225 | 30.019231 | 77 | py |
parameter-exchange | parameter-exchange-master/src/lib/config.py | #!/usr/bin/env python3
"""This module contains central configurations.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import math
import multiprocessing
import os
# GENERAL-------------------------------------------------------------------... | 4,658 | 38.483051 | 80 | py |
parameter-exchange | parameter-exchange-master/src/lib/user_database.py | #!/usr/bin/env python3
"""User management for access control.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
import secrets
import sqlite3
from abc import abstractmethod
from typing import List, Callable
import sqlalchemy
from werkzeug.sec... | 7,043 | 30.587444 | 78 | py |
parameter-exchange | parameter-exchange-master/src/lib/db_argparser.py | #!/usr/bin/env python3
"""Argument Parser for DB CLIs.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
def get_db_parser() -> argparse.ArgumentParser:
"""Return an argument parser for the DB CLIs."""
db_parser = argparse.Argument... | 1,816 | 44.425 | 79 | py |
parameter-exchange | parameter-exchange-master/src/lib/database.py | #!/usr/bin/env python3
"""Database Models shared by both server types.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
from datetime import datetime
from typing import List
from flask_sqlalchemy import SQLAlchemy
import logging
db = SQLAlchemy()
log: log... | 1,419 | 27.4 | 63 | py |
parameter-exchange | parameter-exchange-master/src/lib/__init__.py | 0 | 0 | 0 | py | |
parameter-exchange | parameter-exchange-master/src/lib/db_cli.py | #!/usr/bin/env python3
"""DB CLI for user DB.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import logging
from typing import List
from flask import Flask
from lib import config
from lib.db_argparser import get_db_parser
from lib.user_database import d... | 5,779 | 40.582734 | 78 | py |
parameter-exchange | parameter-exchange-master/src/lib/helpers.py | #!/usr/bin/env python3
"""This module contains small helper functions.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import base64
import logging
import multiprocessing
import os
import platform
import random
import re
import socket
import ssl
import sub... | 11,438 | 29.75 | 79 | py |
parameter-exchange | parameter-exchange-master/src/tls_test/tls_client.py | #!/usr/bin/env python3
"""This module tests the TLS Handshake and Record Protocol Performance.
Start echo_server.sh in another terminal.
Copyright (c) 2020.
Author: Erik Buchholz
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import argparse
import os
import socket
import ssl
import time
from tq... | 6,477 | 41.064935 | 122 | py |
parameter-exchange | parameter-exchange-master/src/tls_test/__init__.py | #!/usr/bin/env python3
"""This module..."""
| 44 | 14 | 22 | py |
parameter-exchange | parameter-exchange-master/cython/psi/cython_setup.py | #!/usr/bin/env python3
"""
Copyright (c) 2020.
Author: Chris Dax
E-mail: [email protected]
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import os
import sys
from distutils.core import setup
from distutils.extension import Extension
from Cython.Build import cythonize
# os.path.dirname mo... | 1,917 | 26.4 | 78 | py |
parameter-exchange | parameter-exchange-master/cython/psi/Tests/sendMain.py | #!/usr/bin/env python3
"""
Copyright (c) 2020.
Author: Chris Dax
E-mail: [email protected]
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
# noinspection PyUnresolvedReferences
from cPSIInterface import PyPSISender
import os
import sys
from config import (
hostname, port, numThreads, ce... | 1,801 | 30.068966 | 80 | py |
parameter-exchange | parameter-exchange-master/cython/psi/Tests/config.py | #!/usr/bin/env python3
"""
Copyright (c) 2020.
Author: Chris Dax
E-mail: [email protected]
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import os
def parent(path: str):
return os.path.dirname(path)
hostname = "127.0.0.1"
port = 12345
numThreads = 1
current_dir = os.path.dirname(o... | 444 | 18.347826 | 63 | py |
parameter-exchange | parameter-exchange-master/cython/psi/Tests/__init__.py | 0 | 0 | 0 | py | |
parameter-exchange | parameter-exchange-master/cython/psi/Tests/recvMain.py | #!/usr/bin/env python3
"""
Copyright (c) 2020.
Author: Chris Dax
E-mail: [email protected]
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
# noinspection PyUnresolvedReferences
from cPSIInterface import PyPSIReceiver
import os
import sys
from config import (
hostname, port, numThreads, ... | 2,340 | 32.927536 | 80 | py |
parameter-exchange | parameter-exchange-master/cython/ot/cython_setup.py | #!/usr/bin/env python3
"""
Copyright (c) 2020.
Author: Chris Dax
E-mail: [email protected]
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import os
import sys
from distutils.core import setup
from distutils.extension import Extension
from Cython.Build import cythonize
# os.path.dirname mo... | 1,918 | 26.414286 | 77 | py |
parameter-exchange | parameter-exchange-master/cython/ot/Test/sendMain.py | #!/usr/bin/env python3
"""
Copyright (c) 2020.
Author: Chris Dax
E-mail: [email protected]
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
from cOTInterface import PyOTSender
import os
import sys
parent_dir = os.path.dirname(os.path.dirname(os.path.abspath(__file__)))
cython_dir = os.path.... | 1,422 | 28.645833 | 72 | py |
parameter-exchange | parameter-exchange-master/cython/ot/Test/recvMain.py | #!/usr/bin/env python3
"""
Copyright (c) 2020.
Author: Chris Dax
E-mail: [email protected]
Maintainer: Erik Buchholz
E-mail: [email protected]
"""
import datetime
# noinspection PyUnresolvedReferences
from cOTInterface import PyOTReceiver
import os
import sys
parent_dir = os.path.dirname(os.path.d... | 2,011 | 30.936508 | 72 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/MGANet_test_LD37.py | #!/usr/bin/env python
# -*- coding: utf-8 -*-
import numpy as np
from numpy import *
# from scipy.misc import imresize
from skimage.measure import compare_ssim
import cv2
import glob
import time
import os
import argparse
import Net.MGANet as MGANet
import torch
import copy
def yuv_import(filename, dims ,startfrm,numf... | 9,952 | 41.900862 | 211 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/MGANet_test_AI37.py | #!/usr/bin/env python
# -*- coding: utf-8 -*-
import numpy as np
from numpy import *
# from scipy.misc import imresize
from skimage.measure import compare_ssim
import cv2
import glob
import time
import os
import argparse
import Net.MGANet as MGANet
import torch
import copy
def yuv_import(filename, dims ,startfrm,numf... | 9,464 | 41.443946 | 209 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/LSTM/functional.py | from functools import partial
import torch
import torch.nn.functional as F
from torch.nn._functions.thnn import rnnFusedPointwise as fusedBackend
from .utils import _single, _pair, _triple
def RNNReLUCell(input, hidden, w_ih, w_hh, b_ih=None, b_hh=None, linear_func=None):
""" Copied from torch.nn._functions.rnn... | 11,086 | 33.755486 | 113 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/LSTM/utils.py | import collections
from itertools import repeat
""" Copied from torch.nn.modules.utils """
def _ntuple(n):
def parse(x):
if isinstance(x, collections.Iterable):
return x
return tuple(repeat(x, n))
return parse
_single = _ntuple(1)
_pair = _ntuple(2)
_triple = _ntuple(3)
_quadru... | 337 | 15.9 | 47 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/LSTM/module.py | import math
from typing import Union, Sequence
import torch
from torch.nn import Parameter
from torch.nn.utils.rnn import PackedSequence
from .functional import AutogradConvRNN, _conv_cell_helper
from .utils import _single, _pair, _triple
class ConvNdRNNBase(torch.nn.Module):
def __init__(self,
... | 35,171 | 33.789318 | 109 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/LSTM/BiConvLSTM.py | import torch.nn as nn
from torch.autograd import Variable
import torch
torch.cuda.set_device(0)
class BiConvLSTMCell(nn.Module):
def __init__(self, input_size, input_dim, hidden_dim, kernel_size, bias):
"""
Initialize ConvLSTM cell.
Parameters
----------
input_size: (int, i... | 6,521 | 39.259259 | 130 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/LSTM/__init__.py | from .module import Conv1dRNN
from .module import Conv1dLSTM
from .module import Conv1dPeepholeLSTM
from .module import Conv1dGRU
from .module import Conv2dRNN
from .module import Conv2dLSTM
from .module import Conv2dPeepholeLSTM
from .module import Conv2dGRU
from .module import Conv3dRNN
from .module import Conv3dLS... | 833 | 26.8 | 42 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/Net/net_view.py | from graphviz import Digraph
from torch.autograd import Variable
import torch
def make_dot(var, params=None):
""" Produces Graphviz representation of PyTorch autograd graph
Blue nodes are the Variables that require grad, orange are Tensors
saved for backward in torch.autograd.Function
Args:
var:... | 2,016 | 37.788462 | 83 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/Net/multiscaleloss.py | import torch
import torch.nn as nn
def EPE(input_image, target_image,L_model=None):
loss_L2 = L_model(input_image,target_image)
return loss_L2
# EPE_map = torch.norm(target_image-input_image,2,1)
# batch_size = EPE_map.size(0)
#
# if mean:
# return EPE_map.mean()
# else:
# ... | 1,280 | 26.255319 | 131 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/Net/MGANet.py | import torch
import torch.nn as nn
from torch.nn.init import kaiming_normal
from LSTM.BiConvLSTM import BiConvLSTM
def conv(batchNorm, in_planes, out_planes, kernel_size=3, stride=1):
if batchNorm:
return nn.Sequential(
nn.Conv2d(in_planes, out_planes, kernel_size=kernel_size, stride=stride, ... | 7,816 | 41.483696 | 142 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/dataloader/read_h5.py | import numpy as np
import cv2
import torch.multiprocessing as mp
mp.set_start_method('spawn')
import h5py
f = h5py.File('../../train_b8_LD37.h5','r')
for key in f.keys():
print(f[key].name,f[key].shape)
# for i in range(1,100):
# cv2.imshow('1.jpg',f[key][i,0,...])
# cv2.waitKey(0)
| 301 | 20.571429 | 43 | py |
MGANet-DCC2020 | MGANet-DCC2020-master/codes/dataloader/h5_dataset_T.py | import torch.utils.data as data
import torch
import numpy as np
from torchvision import transforms, datasets
import h5py
def data_augmentation(image, mode):
if mode == 0:
# original
return image
elif mode == 1:
# flip up and down
return np.flipud(image)
elif mode == 2:
... | 3,692 | 38.287234 | 219 | py |
gwsky | gwsky-master/examples/GWMC.py |
import argparse
from datetime import datetime
import numpy as np
from bilby.gw import WaveformGenerator
from bilby.gw.source import lal_binary_black_hole
from bilby.gw.detector import InterferometerList, load_interferometer
from bilby.core.prior import PriorDict, Uniform, Sine
from bilby.gw.prior import UniformSourc... | 2,796 | 33.530864 | 123 | py |
gwsky | gwsky-master/gwsky/sampler.py | import numpy as np
from pathos import multiprocessing
from datetime import datetime
from .evaluator import BaseEvaluator
from .result import Result
from .para_sampler import ParameterSampler
from typing import List, Optional
from .typing import ParameterVector, ParameterDict, SampleResult
class Sampler:
def __... | 3,437 | 40.421687 | 102 | py |
gwsky | gwsky-master/gwsky/typing.py | import numpy as np
from typing import List, Dict, Tuple, Union
ParameterDict = Dict[str, float]
ParameterVector = List[float]
ParaNameList = List[str]
Value = Union[float, complex, np.ndarray]
DerivateDict = Dict[str, Value]
FisherMatrix = np.ndarray
SampleResult = List[Tuple[ParameterVector, float, FisherMatrix]]
... | 380 | 24.4 | 64 | py |
gwsky | gwsky-master/gwsky/utils.py | import numpy as np
import healpy as hp
from scipy.special import sph_harm
from functools import reduce
import quaternionic
import spherical
import matplotlib.pyplot as plt
from healpy.projaxes import HpxMollweideAxes
from typing import Tuple, Optional, List, Dict
from .typing import SHModes, Value
def ra_dec_to_th... | 4,056 | 32.254098 | 100 | py |
gwsky | gwsky-master/gwsky/converter.py | from abc import ABCMeta, abstractmethod
import numpy as np
import healpy as hp
from typing import Callable
from .typing import ParameterDict, ParaNameList
class ParameterConverter(metaclass=ABCMeta):
def __init__(self) -> None:
pass
@abstractmethod
def __call__(self, parameters: ParameterDict) ... | 5,201 | 35.633803 | 102 | py |
gwsky | gwsky-master/gwsky/__init__.py | from .evaluator import BaseEvaluator, BilbyEvaluator, BilbyEvaluatorRotated, GWBEvaluator
from .result import Result
from .catalog import GWCatalog
from .sampler import Sampler
from .para_sampler import ParameterSampler, PriorDictSampler, \
O3aMassSampler, uniform_sky_sampler, SHSkySampler, DipoleSkySampler
from .... | 400 | 49.125 | 89 | py |
gwsky | gwsky-master/gwsky/catalog.py | import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
from .utils import spherical_harmonic_modes, catalog_delta_map, plot_hp_map
from typing import Dict, List, Optional, Tuple, Iterable
from .typing import ParameterVector, ParaNameList, SHModes, SHModeLM
class GWCatalog:
def __init__(self, ev... | 3,929 | 39.515464 | 147 | py |
gwsky | gwsky-master/gwsky/result.py | import json
import numpy as np
import pandas as pd
from .catalog import GWCatalog
from .converter import ParameterConverter, NoConvert
from typing import Optional, Union, Callable, List, Dict
from .typing import ParameterDict, ParaNameList, FisherMatrix, ParameterVector, SampleResult
ConverterFunc = Callable[[Param... | 11,793 | 42.681481 | 129 | py |
gwsky | gwsky-master/gwsky/evaluator/utils.py | import numpy as np
from numdifftools import Gradient
from typing import Callable, Tuple, Union
from ..typing import ParaNameList, ParameterDict, ParameterVector, Value, DerivateDict
def derivate_central(func, parameters: ParameterDict, deriv_para: ParaNameList, step: float = 1e-7) -> DerivateDict:
deriv = {}
... | 3,690 | 40.011111 | 117 | py |
gwsky | gwsky-master/gwsky/evaluator/evaluator.py | from abc import ABCMeta, abstractmethod
from ..typing import ParameterDict, ParaNameList, FisherMatrix
class BaseEvaluator(metaclass=ABCMeta):
@abstractmethod
def snr(self, parameters: ParameterDict) -> float:
pass
@abstractmethod
def fisher(self, parameters: ParameterDict) -> FisherMatrix:
... | 414 | 20.842105 | 64 | py |
gwsky | gwsky-master/gwsky/evaluator/__init__.py | from .evaluator import BaseEvaluator
from .gwb import GWBEvaluator
from .bilby import BilbyEvaluator, BilbyEvaluatorRotated | 123 | 40.333333 | 56 | py |
gwsky | gwsky-master/gwsky/evaluator/bilby.py | import numpy as np
import healpy as hp
from bilby.gw import WaveformGenerator
from bilby.gw.detector import Interferometer, InterferometerList
from bilby.gw.utils import noise_weighted_inner_product
from .evaluator import BaseEvaluator
from ..converter import RotationConverter
from .utils import derivate_central
from... | 5,630 | 46.319328 | 154 | py |
gwsky | gwsky-master/gwsky/evaluator/gwb.py | import numpy as np
from gwbench.network import Network
from .evaluator import BaseEvaluator
from typing import List, Optional
from ..typing import ParameterDict, ParaNameList, FisherMatrix
class GWBEvaluator(BaseEvaluator):
def __init__(self, network_specs: List[str], frequency_array: np.ndarray, waveform_appr... | 1,933 | 40.148936 | 136 | py |
gwsky | gwsky-master/gwsky/para_sampler/mass.py | import numpy as np
from bilby.core.prior import Prior, Interped
from .para_sampler import ParameterSampler
from typing import Optional
from ..typing import ParaNameList, ParameterVector
class PowerLawPeakMass(Interped):
'''
Power Law + Peak model in 2010.14533
'''
def __init__(self, m_min, m_max, d... | 3,309 | 29.648148 | 93 | py |
gwsky | gwsky-master/gwsky/para_sampler/para_sampler.py | from abc import ABCMeta, abstractmethod
from ..typing import ParaNameList, ParameterVector
class ParameterSampler(metaclass=ABCMeta):
def __init__(self) -> None:
pass
@property
@abstractmethod
def keys(self) -> ParaNameList:
pass
@abstractmethod
def sample(self) -> Parameter... | 341 | 18 | 50 | py |
gwsky | gwsky-master/gwsky/para_sampler/prior_dict.py | from bilby.core.prior import PriorDict
from .para_sampler import ParameterSampler
from ..typing import ParaNameList, ParameterVector
class PriorDictSampler(ParameterSampler):
def __init__(self, priors: PriorDict) -> None:
self.priors = priors
self._keys = list(priors.keys())
@property
d... | 513 | 24.7 | 52 | py |
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